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Locus name | AT1G05000 |
Organism | Arabidopsis thaliana | Taxonomic identifier | [NCBI] | Function category | Protein degradation/modification | Effect for Senescence | unclear | Gene Description | tyrosine specific protein phosphatase family protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: dephosphorylation. Gene expression is increased during leaf senescence. | Evidence | Genomic evidence:microarray data [Ref 1] | References | 1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-WollastonHigh-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.Plant Cell 2011 Mar;23(3):873-94 | Gene Ontology | | Sequence | AT1G05000.1 | Genomic | mRNA | CDS | Protein AT1G05000.2 | Genomic | mRNA | CDS | Protein
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Ortholog Group | |
| Ortholog Groups: OG5_131528 | |
Cross Link | |
| Database | Entry ID | E-value | Start | End | InterPro ID | Description | PANTHER | PTHR31126 | 3.7E-98 | 1 | 215 | No hit | NA | Pfam | PF03162 | 1.4E-67 | 53 | 206 | IPR004861 | Protein-tyrosine phosphatase, SIW14-like | PRINTS | PR01911 | 4.0E-33 | 53 | 70 | IPR020428 | Protein-tyrosine phosphatase, dual specificity phosphatase, eukaryotic | SUPERFAMILY | SSF52799 | 3.8E-41 | 53 | 199 | No hit | NA | PRINTS | PR01911 | 4.0E-33 | 90 | 103 | IPR020428 | Protein-tyrosine phosphatase, dual specificity phosphatase, eukaryotic | PRINTS | PR01911 | 4.0E-33 | 109 | 123 | IPR020428 | Protein-tyrosine phosphatase, dual specificity phosphatase, eukaryotic | PRINTS | PR01911 | 4.0E-33 | 126 | 140 | IPR020428 | Protein-tyrosine phosphatase, dual specificity phosphatase, eukaryotic | ProSitePatterns | PS00383 | NA | 148 | 158 | IPR016130 | Protein-tyrosine phosphatase, active site |
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