Basic information
Locus name	AT1G04160
Alias	MYOSIN XI B
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	MYOSIN XI B (XIB); FUNCTIONS IN: motor activity; INVOLVED IN: root hair elongation, actin filament-based movement; LOCATED IN: myosin complex; Gene expression is increased during leaf senescence.
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	cellular component myosin complex molecular function ATP binding motor activity
Sequence	AT1G04160.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_126577	Accession Taxon NP_001078755 Arabidopsis thaliana NP_001154628 Arabidopsis thaliana NP_001154724 Arabidopsis thaliana NP_171912 ( AT1G04160 ) Arabidopsis thaliana NP_171954 Arabidopsis thaliana NP_172349 Arabidopsis thaliana NP_173201 Arabidopsis thaliana NP_175453 Arabidopsis thaliana NP_175858 Arabidopsis thaliana NP_179619 Arabidopsis thaliana NP_180749 Arabidopsis thaliana NP_180882 Arabidopsis thaliana NP_188630 Arabidopsis thaliana NP_191375 Arabidopsis thaliana NP_194467 Arabidopsis thaliana NP_194600 Arabidopsis thaliana NP_195046 Arabidopsis thaliana NP_197549 Arabidopsis thaliana NP_199203 Arabidopsis thaliana NP_568806 Arabidopsis thaliana 113760 Chlamydomonas reinhardtii 119317 Chlamydomonas reinhardtii 185104 Chlamydomonas reinhardtii ACO61499 Micromonas sp. RCC299 ACO63127 Micromonas sp. RCC299 NP_001048291 Oryza sativa Japonica Group NP_001048517 Oryza sativa Japonica Group NP_001050932 Oryza sativa Japonica Group NP_001051263 Oryza sativa Japonica Group NP_001051975 Oryza sativa Japonica Group NP_001057670 Oryza sativa Japonica Group NP_001059992 Oryza sativa Japonica Group NP_001064379 Oryza sativa Japonica Group NP_001064913 Oryza sativa Japonica Group gw1.06.00.17.1 Ostreococcus tauri e_gw1.104.11.1 Physcomitrella patens subsp. patens e_gw1.131.148.1 Physcomitrella patens subsp. patens e_gw1.17.29.1 Physcomitrella patens subsp. patens e_gw1.199.2.1 Physcomitrella patens subsp. patens e_gw1.228.2.1 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_1310096 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_1740065 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_66000125 Physcomitrella patens subsp. patens 29680.m001667 Ricinus communis 29739.m003628 Ricinus communis 29883.m002029 Ricinus communis 29904.m003042 Ricinus communis 29912.m005301 Ricinus communis 30027.m000814 Ricinus communis 30094.m000665 Ricinus communis 30204.m001832 Ricinus communis 30226.m002051 Ricinus communis e_gw1.11a.9.1 Thalassiosira pseudonana CCMP1335 e_gw1.14.10.1 Thalassiosira pseudonana CCMP1335 e_gw1.17.13.1 Thalassiosira pseudonana CCMP1335 e_gw1.19a.1.1 Thalassiosira pseudonana CCMP1335 e_gw1.19c.1.1 Thalassiosira pseudonana CCMP1335 e_gw1.2.25.1 Thalassiosira pseudonana CCMP1335 e_gw1.3.28.1 Thalassiosira pseudonana CCMP1335 gw1.1.52.1 Thalassiosira pseudonana CCMP1335 gw1.15.11.1 Thalassiosira pseudonana CCMP1335 gw1.3.40.1 Thalassiosira pseudonana CCMP1335 XP_002947426 Volvox carteri f. nagariensis XP_002954496 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR13140 0.0 1 1048 No hit NA Pfam PF02736 1.3E-12 11 49 IPR004009 Myosin, N-terminal, SH3-like SUPERFAMILY SSF52540 1.3E-284 33 785 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMART SM00242 0.0 56 733 IPR001609 Myosin head, motor domain Pfam PF00063 6.2E-242 64 720 IPR001609 Myosin head, motor domain PRINTS PR00193 5.6E-62 92 111 IPR001609 Myosin head, motor domain PRINTS PR00193 5.6E-62 149 174 IPR001609 Myosin head, motor domain PRINTS PR00193 5.6E-62 197 224 IPR001609 Myosin head, motor domain PRINTS PR00193 5.6E-62 430 458 IPR001609 Myosin head, motor domain PRINTS PR00193 5.6E-62 483 511 IPR001609 Myosin head, motor domain SMART SM00015 21.0 734 756 IPR000048 IQ motif, EF-hand binding site Pfam PF00612 0.0 737 755 IPR000048 IQ motif, EF-hand binding site SMART SM00015 0.0 757 779 IPR000048 IQ motif, EF-hand binding site ProSiteProfiles PS50096 10.0 758 787 IPR000048 IQ motif, EF-hand binding site Pfam PF00612 1.6E-4 761 778 IPR000048 IQ motif, EF-hand binding site SMART SM00015 8.7 782 804 IPR000048 IQ motif, EF-hand binding site ProSiteProfiles PS50096 8.1 783 810 IPR000048 IQ motif, EF-hand binding site Pfam PF00612 0.0 785 803 IPR000048 IQ motif, EF-hand binding site SUPERFAMILY SSF52540 6.6E-17 785 883 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMART SM00015 37.0 805 827 IPR000048 IQ motif, EF-hand binding site ProSiteProfiles PS50096 7.3 808 835 IPR000048 IQ motif, EF-hand binding site Pfam PF00612 0.1 809 826 IPR000048 IQ motif, EF-hand binding site SMART SM00015 0.0 830 852 IPR000048 IQ motif, EF-hand binding site ProSiteProfiles PS50096 8.7 831 860 IPR000048 IQ motif, EF-hand binding site Pfam PF00612 3.0E-4 832 852 IPR000048 IQ motif, EF-hand binding site SMART SM00015 0.0 853 875 IPR000048 IQ motif, EF-hand binding site ProSiteProfiles PS50096 8.8 854 883 IPR000048 IQ motif, EF-hand binding site Pfam PF00612 8.1E-5 856 875 IPR000048 IQ motif, EF-hand binding site Coils Coil NA 877 951 No hit NA Coils Coil NA 972 1000 No hit NA Coils Coil NA 1014 1049 No hit NA Coils Coil NA 1093 1114 No hit NA ProSiteProfiles PS51126 52.4 1146 1447 IPR002710 Dilute Pfam PF01843 1.1E-32 1324 1428 IPR018444 Dil domain
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787