Basic information
Locus name	AT1G03530
Alias	NAF1
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation
Effect for Senescence	unclear
Gene Description	NUCLEAR ASSEMBLY FACTOR 1 (NAF1). Gene expression is increased during leaf senescence.
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process ribosome biogenesis snRNA pseudouridine synthesis molecular function snoRNA binding
Sequence	AT1G03530.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT1G03530.1  miRNA: ath-miR414 miRNA: ath-miR414 mfe: -34.4 kcal/mol  p-value: 0.000370  position: 1014  target 5' A               U     U  3'             UGAUGAUGAUGAUGA GAUGA                 ACUGCUACUACUACU CUACU      miRNA  3'                 U        5'
Ortholog Group
Ortholog Groups: OG5_130006	Accession Taxon NP_171852 ( AT1G03530 ) Arabidopsis thaliana CMR372C Cyanidioschyzon merolae strain 10D ACO63718 Micromonas sp. RCC299 NP_001055976 Oryza sativa Japonica Group fgenesh1_pg.scaffold_120000108 Physcomitrella patens subsp. patens 29983.m003253 Ricinus communis estExt_fgenesh1_pg.C_chr_30753 Thalassiosira pseudonana CCMP1335
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR31633 1.7E-29 257 785 No hit NA Pfam PF04410 1.8E-38 361 509 IPR007504 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 SUPERFAMILY SSF50447 2.2E-9 383 444 IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel Coils Coil NA 491 512 No hit NA