Basic information
Locus name	AT1G03040
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation
Effect for Senescence	unclear
Gene Description	basic helix-loop-helix (bHLH) family protein; FUNCTIONS IN: transcription factor activity, DNA binding; INVOLVED IN: regulation of transcription, acetyl-CoA biosynthetic process from pyruvate. Gene expression is increased during leaf senescence.
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function protein dimerization activity
Sequence	AT1G03040.1 | Genomic | mRNA | CDS | Protein AT1G03040.2 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_160007	Accession Taxon NP_001031577 Arabidopsis thaliana NP_001118919 Arabidopsis thaliana NP_563672 ( AT1G03040 ) Arabidopsis thaliana NP_567245 Arabidopsis thaliana NP_001051563 Oryza sativa Japonica Group 29598.m000464 Ricinus communis 29883.m001988 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR16223 6.6E-197 2 297 No hit NA SUPERFAMILY SSF47459 2.4E-14 143 204 IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain ProSiteProfiles PS50888 15.7 145 194 IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain Pfam PF00010 1.8E-6 150 194 IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain SMART SM00353 1.3E-9 151 200 IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787