Basic information
Locus name	AT5G26340
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Nutrient recycling
Effect for Senescence	unclear
Gene Description	hexose transporter, putative strong similarity to hexose transporter, Lycopersicon esculentum, GI:5734440; contains Pfam profile PF00083: major facilitator superfamily protein
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4):567-85
Gene Ontology	biological process transmembrane transport cellular component membrane molecular function substrate-specific transmembrane transporter activity
Pathway	Reactome REACT_15518
Sequence	AT5G26340.1 | Genomic | mRNA | CDS | Protein
Microarray
Sampling	Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4)
Comparation	Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. D/L: ratio of DARK 5d/control. CD: Cell Death, ratio of starved cell suspension culture/control. Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
miRNA Interaction
Details	target: AT5G26340.1  miRNA: ath-miR2111a miRNA: ath-miR2111a mfe: -24.2 kcal/mol  p-value: 0.055933  position:  664  target 5' G   G  G      G      U 3'             GAG UU GGGAUG AGGUUA              UUU GA UCCUAC UCUAAU   miRNA  3' A   G  G      G        5'  target: AT5G26340.1  miRNA: ath-miR2111b miRNA: ath-miR2111b mfe: -24.2 kcal/mol  p-value: 0.053856  position:  664  target 5' G   G  G      G      U 3'             GAG UU GGGAUG AGGUUA              UUU GA UCCUAC UCUAAU   miRNA  3' A   G  G      G        5'  target: AT5G26340.1  miRNA: ath-miR837-5p miRNA: ath-miR837-5p mfe: -22.6 kcal/mol  p-value: 0.083401  position:  1690  target 5' A    G                A 3'             GAGA UGAACAAGAGG UGGU              CUUU GCUUGUUCUUU ACUA   miRNA  3' A                G      5'  target: AT5G26340.1  miRNA: ath-miR857 miRNA: ath-miR857 mfe: -20.7 kcal/mol  p-value: 0.092133  position:  89  target 5' U    A        A      U 3'             UGCG CUUCGGCG ACGGAG              AUGU GAAGUUGU UGUUUU   miRNA  3' U    G        A        5'
Ortholog Group
Ortholog Groups: OG5_126798	Accession Taxon NP_172592 Arabidopsis thaliana NP_175449 Arabidopsis thaliana NP_188627 Arabidopsis thaliana NP_188628 Arabidopsis thaliana NP_192114 Arabidopsis thaliana NP_193879 Arabidopsis thaliana NP_197718 Arabidopsis thaliana NP_198006 ( AT5G26340 ) Arabidopsis thaliana NP_001043369 Oryza sativa Japonica Group NP_001043370 Oryza sativa Japonica Group NP_001050592 Oryza sativa Japonica Group NP_001058704 Oryza sativa Japonica Group NP_001059981 Oryza sativa Japonica Group NP_001061127 Oryza sativa Japonica Group NP_001063176 Oryza sativa Japonica Group estExt_Genewise1.C_80081 Physcomitrella patens subsp. patens estExt_fgenesh1_kg.C_1010001 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_4380009 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_8000054 Physcomitrella patens subsp. patens 29737.m001257 Ricinus communis 29757.m000728 Ricinus communis 29757.m000735 Ricinus communis 29757.m000741 Ricinus communis 29844.m003369 Ricinus communis 29933.m001432 Ricinus communis 30110.m000714 Ricinus communis 30113.m001429 Ricinus communis 30190.m011122 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR24063 0.0 11 514 No hit NA TIGRFAM TIGR00879 3.2E-119 20 484 IPR003663 Sugar/inositol transporter ProSiteProfiles PS50850 44.9 26 477 IPR020846 Major facilitator superfamily domain Pfam PF00083 4.5E-123 27 486 IPR005828 General substrate transporter SUPERFAMILY SSF103473 4.8E-55 28 486 IPR016196 Major facilitator superfamily domain, general substrate transporter PRINTS PR00171 3.0E-31 34 44 IPR003663 Sugar/inositol transporter PRINTS PR00171 3.0E-31 138 157 IPR003663 Sugar/inositol transporter PRINTS PR00171 3.0E-31 295 305 IPR003663 Sugar/inositol transporter ProSitePatterns PS00216 NA 339 356 IPR005829 Sugar transporter, conserved site PRINTS PR00171 3.0E-31 390 411 IPR003663 Sugar/inositol transporter PRINTS PR00171 3.0E-31 413 425 IPR003663 Sugar/inositol transporter
Subcellular Localization
Localization	plasma membrane
Evidence	SUBAcon
Pubmed ID	23180787