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| Locus name | AT3G06420 |
| Alias | ATG8H | | Organism | Arabidopsis thaliana | | Taxonomic identifier | [NCBI] | | Function category | Nutrient recycling:Autophagy | | Effect for Senescence | delay | | Gene Description | Autophagy gene 8h | | Evidence | Molecular and physiologic evidence:GUS staining [Ref 1]; Genomic evidence:microarray data [Ref 2] | | References | 1: Slavikova S, Shy G, Yao Y, Glozman R, Levanony H, Pietrokovski S, Elazar Z, Galili GThe autophagy-associated Atg8 gene family operates both under favourable growth conditions and under starvation stresses in Arabidopsis plants.J. Exp. Bot. 2005 Nov;56(421):2839-492: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJComparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.Plant J. 2005 May;42(4):567-85 | | Sequence | AT3G06420.1 | Genomic | mRNA | CDS | Protein
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| | Sampling |
Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4) | | Comparation |
Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
D/L: ratio of DARK 5d/control.
CD: Cell Death, ratio of starved cell suspension culture/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence. |
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| | Localization | cytosol | | Evidence | SUBAcon | | Pubmed ID | 23180787 |
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