Basic information   
Locus name AT1G04940
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryNutrient recycling
Effect for Senescenceunclear
Gene Descriptiontic20 family protein similar to Tic20 (GI:3769673) [Pisum sativum]; contains TIGRFAM IGR00994: chloroplast protein import component, Tic20 family
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4):567-85

SequenceAT1G04940.1 | Genomic | mRNA | CDS | Protein
Microarray   
Sampling Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4)
Comparation Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
D/L: ratio of DARK 5d/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group      
Ortholog Groups: OG5_150248
AccessionTaxon
NP_171986 ( AT1G04940 ) Arabidopsis thaliana
33679Chlamydomonas reinhardtii
ACO67178Micromonas sp. RCC299
NP_001047425Oryza sativa Japonica Group
NP_001060030Oryza sativa Japonica Group
e_gw1.09.00.444.1Ostreococcus tauri
e_gw1.197.151.1Physcomitrella patens subsp. patens
e_gw1.54.307.1Physcomitrella patens subsp. patens
30170.m014223Ricinus communis
XP_002952958Volvox carteri f. nagariensis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
TIGRFAMTIGR009941.4E-12157274IPR005691Chloroplast protein import component Tic20
PfamPF096859.9E-17182263IPR019109Tic20-like protein