Basic information
Locus name	AT1G67360
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Lipid/Carbohydrate metabolism
Effect for Senescence	unclear
Gene Description	rubber elongation factor (REF) family protein contains Pfam profile: PF05755 rubber elongation factor protein (REF)
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4):567-85
Sequence	AT1G67360.1 | Genomic | mRNA | CDS | Protein AT1G67360.2 | Genomic | mRNA | CDS | Protein
Microarray
Sampling	Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4)
Comparation	Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. D/L: ratio of DARK 5d/control. CD: Cell Death, ratio of starved cell suspension culture/control. Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
miRNA Interaction
Details	target: AT1G67360.1  miRNA: ath-miR419 miRNA: ath-miR419 mfe: -24.7 kcal/mol  p-value: 0.014915  position:  163  target 5' A                    G 3'             AACA CC UAGCGUUCGUGA              UUGU GG GUCGUAAGUAUU   miRNA  3' G    A  A              5'  target: AT1G67360.2  miRNA: ath-miR419 miRNA: ath-miR419 mfe: -24.7 kcal/mol  p-value: 0.016495  position:  261  target 5' A                    G 3'             AACA CC UAGCGUUCGUGA              UUGU GG GUCGUAAGUAUU   miRNA  3' G    A  A              5'
Ortholog Group
Ortholog Groups: OG5_189909	Accession Taxon NP_176904 ( AT1G67360 ) Arabidopsis thaliana NP_849856 Arabidopsis thaliana 29929.m004653 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description Pfam PF05755 5.1E-81 5 209 IPR008802 Rubber elongation factor
Subcellular Localization
Localization 1 Localization plasma membrane,endoplasmic reticulum Evidence SUBAcon Pubmed ID 23180787
Localization 2 Localization vacuole,plasma membrane Evidence SUBAcon Pubmed ID 23180787