Basic information
Locus name	AT2G34500
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Redox regulation
Effect for Senescence	unclear
Gene Description	cytochrome P450 family protein similar to Cytochrome P450 61 (C-22 sterol desaturase) (SP:P54781) {Saccharomyces cerevisiae}
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4):567-85
Gene Ontology	biological process oxidation-reduction process molecular function electron carrier activity heme binding iron ion binding oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
Pathway	Reactome REACT_13433
Sequence	AT2G34500.1 | Genomic | mRNA | CDS | Protein
Microarray
Sampling	Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4)
Comparation	Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. D/L: ratio of DARK 5d/control. CD: Cell Death, ratio of starved cell suspension culture/control. Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
miRNA Interaction
Details	target: AT2G34500.1  miRNA: ath-miR2933a miRNA: ath-miR2933a mfe: -27.9 kcal/mol  p-value: 0.006310  position:  1062  target 5' C         G            C 3'             GGUG GUUU CUCUUCGAUUUU              CCGC UAAA GAGAGGCUAAAG   miRNA  3'      U    G              5'  target: AT2G34500.1  miRNA: ath-miR2933b miRNA: ath-miR2933b mfe: -27.9 kcal/mol  p-value: 0.008772  position:  1062  target 5' C         G            C 3'             GGUG GUUU CUCUUCGAUUUU              CCGC UAAA GAGAGGCUAAAG   miRNA  3'      U    G              5'  target: AT2G34500.1  miRNA: ath-miR866-3p miRNA: ath-miR866-3p mfe: -25.1 kcal/mol  p-value: 0.009052  position:  766  target 5' A     C      U      U 3'             CUUCG AGACGG UUUUGU              GAAGU UCUGCC AAAACA   miRNA  3' A     U      U        5'
Ortholog Group
Ortholog Groups: OG5_131167	Accession Taxon NP_180451 Arabidopsis thaliana NP_180452 Arabidopsis thaliana NP_180996 Arabidopsis thaliana NP_180997 ( AT2G34500 ) Arabidopsis thaliana CMJ270C Cyanidioschyzon merolae strain 10D CMJ284C Cyanidioschyzon merolae strain 10D 196874 Chlamydomonas reinhardtii NP_001042372 Oryza sativa Japonica Group NP_001042373 Oryza sativa Japonica Group NP_001042374 Oryza sativa Japonica Group e_gw1.443.3.1 Physcomitrella patens subsp. patens estExt_Genewise1.C_220219 Physcomitrella patens subsp. patens 28223.m000100 Ricinus communis 29634.m002092 Ricinus communis 29863.m001089 Ricinus communis 29982.m000224 Ricinus communis XP_002958027 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR24286 5.9E-274 7 494 No hit NA SUPERFAMILY SSF48264 2.1E-77 30 487 IPR001128 Cytochrome P450 Pfam PF00067 4.0E-47 76 451 IPR001128 Cytochrome P450 PRINTS PR00385 3.8E-5 295 312 IPR001128 Cytochrome P450 PRINTS PR00463 3.4E-9 304 330 IPR002401 Cytochrome P450, E-class, group I PRINTS PR00385 3.8E-5 350 361 IPR001128 Cytochrome P450 PRINTS PR00463 3.4E-9 388 412 IPR002401 Cytochrome P450, E-class, group I PRINTS PR00463 3.4E-9 424 434 IPR002401 Cytochrome P450, E-class, group I PRINTS PR00385 3.8E-5 425 434 IPR001128 Cytochrome P450 ProSitePatterns PS00086 NA 427 436 IPR017972 Cytochrome P450, conserved site PRINTS PR00385 3.8E-5 434 445 IPR001128 Cytochrome P450 PRINTS PR00463 3.4E-9 434 457 IPR002401 Cytochrome P450, E-class, group I