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Locus name | AT4G09010 |
Alias | APX4 |
Organism | Arabidopsis thaliana |
Taxonomic identifier | [NCBI] |
Function category | Redox regulation:ROS |
Effect for Senescence | delay |
Gene Description | Down-regulated during leaf senescence;Plays a key role in hydrogen peroxide removal |
Evidence | Molecular evidence:Real-Time PCR [Ref 1] |
References | 1: Panchuk II, Zentgraf U, Volkov RAExpression of the Apx gene family during leaf senescence of Arabidopsis thaliana.Planta 2005 Nov;222(5):926-32 |
Gene Ontology | |
Pathway | |
Sequence | AT4G09010.1 | Genomic | mRNA | CDS | Protein
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miRNA Interaction | |
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Details | | target: AT4G09010.1 miRNA: ath-miR854a miRNA: ath-miR854a mfe: -31.0 kcal/mol p-value: 0.003902
position: 93 target 5' U U A 3' UC CUCUUCUCUGU CUCAUC AG GAGGAGGGAUA GAGUAG miRNA 3' G G 5'
target: AT4G09010.1 miRNA: ath-miR854b miRNA: ath-miR854b mfe: -31.0 kcal/mol p-value: 0.005133
position: 93 target 5' U U A 3' UC CUCUUCUCUGU CUCAUC AG GAGGAGGGAUA GAGUAG miRNA 3' G G 5'
target: AT4G09010.1 miRNA: ath-miR854c miRNA: ath-miR854c mfe: -31.0 kcal/mol p-value: 0.003992
position: 93 target 5' U U A 3' UC CUCUUCUCUGU CUCAUC AG GAGGAGGGAUA GAGUAG miRNA 3' G G 5'
target: AT4G09010.1 miRNA: ath-miR854d miRNA: ath-miR854d mfe: -31.0 kcal/mol p-value: 0.003998
position: 93 target 5' U U A 3' UC CUCUUCUCUGU CUCAUC AG GAGGAGGGAUA GAGUAG miRNA 3' G G 5'
target: AT4G09010.1 miRNA: ath-miR854e miRNA: ath-miR854e mfe: -31.0 kcal/mol p-value: 0.005180
position: 93 target 5' U U A 3' UC CUCUUCUCUGU CUCAUC AG GAGGAGGGAUA GAGUAG miRNA 3' G G 5'
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Ortholog Group | |
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Ortholog Groups: OG5_153336 | |
Cross Link | |
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Localization 1 | Localization | chloroplast | Evidence | Localization with GFP-fusion protein (GFP:cDNA) | Pubmed ID | 10737809 |
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Localization 2 | Localization | cytoplasm and nucleus | Evidence | Localization with GFP-ORF fusion protein (GFP:cDNA) | Pubmed ID | 15610358 |
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Localization 3 | Localization | plastid | Evidence | SUBAcon | Pubmed ID | 23180787 |
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