|
|
|
|
| Locus name | AT3G22460 |
| Organism | Arabidopsis thaliana | | Taxonomic identifier | [NCBI] | | Function category | Nutrient recycling | | Effect for Senescence | unclear | | Gene Description | cysteine synthase, putative / O-acetylserine (thiol)-lyase, putative / O-acetylserine sulfhydrylase, putative nearly identical over 185 amino acids to SP|P47998 Cysteine synthase (EC 4.2.99.8) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) {Arabidopsis thaliana} | | Evidence | Genomic evidence:microarray data [Ref 1] | | References | 1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJComparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.Plant J. 2005 May;42(4):567-85 | | Gene Ontology | | | Sequence | AT3G22460.1 | Genomic | mRNA | CDS | Protein
|
| | Sampling |
Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4) | | Comparation |
Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
D/L: ratio of DARK 5d/control.
CD: Cell Death, ratio of starved cell suspension culture/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence. |
miRNA Interaction  | |
| | Details | | target: AT3G22460.1
miRNA: ath-miR869
miRNA: ath-miR869
mfe: -22.5 kcal/mol
p-value: 0.039324
position: 320
target 5' G U C 3'
AACACUGGAGUUGG UUAG
UUGUGGUCUUAACU GGUU
miRNA 3' G U A 5'
|
|
| Cross Link | |
| |
|
