Basic information
Locus name	AT5G51770
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Protein degradation/modification:protein kinase and phosphatases
Effect for Senescence	unclear
Gene Description	protein kinase family protein contains protein kinase domain, Pfam:PF00069
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4):567-85
Gene Ontology	biological process protein phosphorylation molecular function ATP binding protein kinase activity
Sequence	AT5G51770.1 | Genomic | mRNA | CDS | Protein
Microarray
Sampling	Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4)
Comparation	Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
miRNA Interaction
Details	target: AT5G51770.1  miRNA: ath-miR779 miRNA: ath-miR779 mfe: -25.8 kcal/mol  p-value: 0.025104  position:  758  target 5' C                    G 3'             UGAG AGUGAUGUAGUGGAA              ACUC UCGUUGUAUCGUCUU   miRNA  3' U    G                 5'  target: AT5G51770.1  miRNA: ath-miR839 miRNA: ath-miR839 mfe: -27.9 kcal/mol  p-value: 0.003935  position:  1219  target 5' C  A            A       G 3'             GG GAAUGGUGAGAG G UGGUG              CC CUUGCUACUUUC C ACCAU   miRNA  3'                   A       5'
Ortholog Group
Ortholog Groups: OG5_190440	Accession Taxon NP_194269 Arabidopsis thaliana NP_199990 ( AT5G51770 ) Arabidopsis thaliana NP_849442 Arabidopsis thaliana
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR24420 5.2E-216 2 649 No hit NA SUPERFAMILY SSF56112 1.6E-60 67 240 IPR011009 Protein kinase-like domain ProSiteProfiles PS50011 29.9 90 632 IPR000719 Protein kinase, catalytic domain SMART SM00220 3.6E-27 90 627 IPR002290 Serine/threonine- / dual specificity protein kinase, catalytic domain Pfam PF07714 7.6E-29 93 248 IPR001245 Serine-threonine/tyrosine-protein kinase catalytic domain ProSitePatterns PS00107 NA 96 121 IPR017441 Protein kinase, ATP binding site ProSitePatterns PS00108 NA 214 226 IPR008271 Serine/threonine-protein kinase, active site SUPERFAMILY SSF56112 1.6E-60 497 644 IPR011009 Protein kinase-like domain Pfam PF00069 1.2E-7 504 621 IPR000719 Protein kinase, catalytic domain
Subcellular Localization
Localization	plastid,nucleus
Evidence	SUBAcon
Pubmed ID	23180787