Basic information
GenBank ID	AF454959
Alias	BoCP4
Organism	Broccoli (Brassica oleracea)
Taxonomic identifier	[NCBI]
Function category	Macromolecule degradation
Effect for Senescence	unclear
Gene Description	The mRNAs encoded by the broccoli cDNAs are expressed in floret tissue during harvest-induced senescence with mRNA accumulating within 6 h of harvest for BoCP1, 12 h of harvest for BoCP4 and within 24 h of harvest for BoCP2 and BoCP3.
Evidence	Molecular evidence:Northern [Ref 1]
References	1: Coupe SA, Sinclair BK, Watson LM, Heyes JA, Eason JR Identification of dehydration-responsive cysteine proteases during post-harvest senescence of broccoli florets. J. Exp. Bot. 2003 Mar;54(384):1045-56
Gene Ontology	biological process proteolysis molecular function cysteine-type peptidase activity
Sequence	AF454959.1 | mRNA | CDS | Protein
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR12411 7.8E-226 13 361 IPR013128 Peptidase C1A, papain SUPERFAMILY SSF54001 2.9E-103 49 358 No hit NA Pfam PF08246 9.0E-12 51 107 IPR013201 Proteinase inhibitor I29, cathepsin propeptide SMART SM00848 1.1E-22 51 107 IPR013201 Proteinase inhibitor I29, cathepsin propeptide Pfam PF00112 1.4E-75 135 358 IPR000668 Peptidase C1A, papain C-terminal SMART SM00645 1.8E-112 135 360 IPR000668 Peptidase C1A, papain C-terminal PRINTS PR00705 1.3E-10 153 168 IPR000668 Peptidase C1A, papain C-terminal ProSitePatterns PS00139 NA 153 164 IPR000169 Cysteine peptidase, cysteine active site ProSitePatterns PS00639 NA 300 310 IPR025660 Cysteine peptidase, histidine active site PRINTS PR00705 1.3E-10 302 312 IPR000668 Peptidase C1A, papain C-terminal PRINTS PR00705 1.3E-10 324 330 IPR000668 Peptidase C1A, papain C-terminal ProSitePatterns PS00640 NA 324 343 IPR025661 Cysteine peptidase, asparagine active site