Genome Assembly

Position and Type

 
 
 
 

Consequence Type

HIGH             

MODERATE 

LOW             

MODIFIER             

Annotation Gene Information

 
 
 
 
 
 
 
mRNA  rRNA  miRNA
 
 

Minor Allele Frequency

  (0-0.5)

ClinVar Traits

Effect             

     Initial 

OMIM Traits

    Initial         

GWAS-Catalog Traits

Ontology             

Genotype to Phenotype

growth
drought tolerance
metabolite
agronomic traits
resistance
flowering time
forage quality
yeild

Pfam

 
 
 

Setting Properties

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Items  1  - 10 of 8665982       Items per page  First Prev of 866599 Next Last
All VarID
Position
Alleles
MAF
Consequence Type|Effect
Gene
dbSNP
ghi1 A01:143 G/A A:0.3886 upstream_gene_variant|MODIFIER CotAD_73188  
ghi2 A01:160 C/A A:0.3119 upstream_gene_variant|MODIFIER CotAD_73188  
ghi3 A01:169 A/G G:0.3325 upstream_gene_variant|MODIFIER CotAD_73188  
ghi4 A01:211 T/C C:0.2596 upstream_gene_variant|MODIFIER CotAD_73188  
ghi5 A01:232 C/T T:0.2440 upstream_gene_variant|MODIFIER CotAD_73188  
ghi6 A01:238 A/G G:0.2344 upstream_gene_variant|MODIFIER CotAD_73188  
ghi7 A01:277 G/A A:0.2146 upstream_gene_variant|MODIFIER CotAD_73188  
ghi8 A01:282 G/A A:0.1914 upstream_gene_variant|MODIFIER CotAD_73188  
ghi9 A01:292 C/T T:0.2000 upstream_gene_variant|MODIFIER CotAD_73188  
ghi10 A01:294 G/A A:0.2420 upstream_gene_variant|MODIFIER CotAD_73188