Genome Assembly

Position and Type

 
 
 
 

Consequence Type

HIGH             

MODERATE 

LOW             

MODIFIER             

Annotation Gene Information

 
 
 
 
 
 
 
mRNA  rRNA  miRNA
 
 

Minor Allele Frequency

  (0-0.5)

ClinVar Traits

Effect             

     Initial 

OMIM Traits

    Initial         

GWAS-Catalog Traits

Ontology             

Genotype to Phenotype

growth
drought tolerance
metabolite
agronomic traits
resistance
flowering time
forage quality
yeild

Setting Properties

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All VarID
Position
Alleles
MAF
Consequence Type|Effect
Gene
dbSNP
ssc1 chr1:83 C/T T:0.0327  
ssc2 chr1:98 C/T T:0.0235  
ssc3 chr1:105 G/T T:0.0023  
ssc4 chr1:192 C/G G:0.0044  
ssc5 chr1:215 G/A A:0.0066  
ssc6 chr1:296 C/G G:0.0195  
ssc7 chr1:297 T/A A:0.0043  
ssc8 chr1:323 T/C C:0.0131  
ssc9 chr1:340 T/C C:0.0091 rs705257210
ssc10 chr1:397 T/A A:0.0196 rs695289577