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Genome Assembly

Position and Type

 
 
 
 

Consequence Type

HIGH             

MODERATE 

LOW             

MODIFIER             

Annotation Gene Information

 
 
 
 
 
 
 
mRNA　 rRNA　 miRNA
 
 

Minor Allele Frequency

  (0-0.5)

ClinVar Traits

Effect             

     Initial 

OMIM Traits

    Initial         

GWAS-Catalog Traits

Ontology             

Genotype to Phenotype

growth
drought tolerance
metabolite
agronomic traits
resistance
flowering time
forage quality
yield

Pfam

 
 
 

Setting Properties

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All VarID
 Position
 Alleles
 MAF
 Consequence Type|Effect
 Gene
 dbSNP
ssc76797396 1:16 C/A C:0.0000 intergenic_variant|MODIFIER;  
ssc76797397 1:24 T/A A:0.0725 intergenic_variant|MODIFIER;  
ssc76797398 1:28 G/A A:0.4776 intergenic_variant|MODIFIER;  
ssc76797399 1:40 G/T T:0.2188 intergenic_variant|MODIFIER;  
ssc76797400 1:70 G/T T:0.0118 intergenic_variant|MODIFIER;  
ssc1 1:83 C/T T:0.0327 intergenic_variant|MODIFIER;  
ssc76797401 1:90 C/A A:0.1322 intergenic_variant|MODIFIER;  
ssc2 1:98 C/T T:0.0235 intergenic_variant|MODIFIER;  
ssc3 1:105 G/T T:0.0023 intergenic_variant|MODIFIER;  
ssc76797402 1:129 A/C C:0.1270 intergenic_variant|MODIFIER;