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Genome Assembly

Position and Type

 
 
 
 

Consequence Type

HIGH             

MODERATE 

LOW             

MODIFIER             

Annotation Gene Information

 
 
 
 
 
 
 
mRNA　 rRNA　 miRNA
 
 

Minor Allele Frequency

  (0-0.5)

ClinVar Traits

Effect             

     Initial 

OMIM Traits

    Initial         

GWAS-Catalog Traits

Ontology             

Genotype to Phenotype

growth
drought tolerance
metabolite
agronomic traits
resistance
flowering time
forage quality
yield

Pfam

 
 
 

Setting Properties

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All VarID
 Position
 Alleles
 MAF
 Consequence Type|Effect
 Gene
 dbSNP
cs19855269 NC_044370.1:1132 T/TAACG TAACG:0.5000 intergenic_variant|MODIFIER;  
cs19855270 NC_044370.1:1306 T/TG TG:0.0079 intergenic_variant|MODIFIER;  
cs19855271 NC_044370.1:1479-1483 TAGTA/T T:0.0086 intergenic_variant|MODIFIER;  
cs19855272 NC_044370.1:1504 G/GC GC:0.1154 intergenic_variant|MODIFIER;  
cs19855273 NC_044370.1:1505 C/CA CA:0.1667 intergenic_variant|MODIFIER;  
cs19855274 NC_044370.1:1508 A/AT AT:0.1163 intergenic_variant|MODIFIER;  
cs19855275 NC_044370.1:1511 A/AT AT:0.0244 intergenic_variant|MODIFIER;  
cs19855276 NC_044370.1:1871 G/GC GC:0.0833 intergenic_variant|MODIFIER;  
cs19855277 NC_044370.1:1872 C/CA CA:0.0806 intergenic_variant|MODIFIER;  
cs19855278 NC_044370.1:1878 A/AT AT:0.0682 intergenic_variant|MODIFIER;