piplineForQC_v2.pl A toolkit for short reads filtering
Introduction
Usage: piplineForQC.pl Command
Command:
adapter => Remove apapter sequence.
quality => Remove low base quality reads.
duplication => Remove duplication reads.
adp_dup => Remove adapter and duplication reads.
adp_qual => Remove adapter and filter low base quality reads.
all => Remove adapter, filter low base quality and remove duplication reads.
Publications
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Credits
- Meiye JIANG jiangmy@big.ac.cn Investigator
BIGD, Beijing Institute of Genomics, Chinese Academy of Sciences, China
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Summary
| Accession | BT007415 |
|---|---|
| Tool Type | Toolkit |
| Category | Read quality control, Error correction, Adapter trimming |
| Platforms | Linux/Unix |
| Technologies | Perl |
| User Interface | Terminal Command Line |
| Input Data | FASTQ |
| Latest Release | 2.0 (February 18, 2024) |
| Download Count | 268 |
| Country/Region | China |
| Submitted By | Meiye JIANG |