National Genomics Data Center

BIG Search

BIG Search is a scalable text search engine built based on ElasticSearch (a highly scalable open-source full-text search and analytics engine based on Apache Lucene). It features cross-domain search and facilitates users to gain access to a wide range of biomedical data, not only from NGDC databases but also partner databases throughout the world.

e.g., PRJCA000126;SAMC000385;tp53;EGFR; human; KaKs_Calculator

Total 45 record(s) from Database Commons

Database: ITS2 Database:Internal Transcribed Spacer 2 Database
attrs.Description: ITS2 Database holds information about sequence, structure and taxonomic classification of all ITS2 in GenBank.
Database: MamPol:Mammalia Polymorphism Database
attrs.Description: MamPol is a website containing all the well-annotated polymorphic sequences available in GenBank
Database: DAGA:DFAST Archive of Genome Annotation
attrs.Description: from both DDBJ/ENA/GenBank and Sequence Read Archive (SRA) was developed. All the genomes deposited in
Database: Mnemiopsis Genome Project Portal:
attrs.Description: sequence data available through GenBank, providing annotations and other key biological information
Database: CDSbank:
attrs.Description: sequence for each protein annotated in Genbank. CDSbank also stores Genbank feature annotation, a flag to
Database: UCSC Archaeal Genome Browser:
attrs.Description: the domain Archaea. Basic gene annotation is derived from NCBI Genbank/RefSeq entries, with
Database: CATH:CATH protein domains database
attrs.Description: superfamilies. Sequences showing identifiable homology to entries in CATH have been extracted from GenBank using PSI-BLAST.
Database: GSDB:The genome sequence DataBase
attrs.Description: the past year: GSDB stopped accepting data submissions from researchers; ownership of data submitted to GSDB was transferred to GenBank;
Database: The human transcript database:
attrs.Description: GenBank and placed them in a single location, the Human Transcript Database.
Database: Transterm:
attrs.Description: RNA (mRNA) from GenBank is extracted and broken into its functional components, its coding sequence