| Species: | Onoclea sensibilis |
| NCBI Taxonomy: | 3281 |
| Organelle: | Chloroplast (NC_035860.1) |
| Edited Genes: | 61 |
| Editing Events: | 137 |
| Gene | Editing Events | Genomic Position | Region | Strand | RNA | Type | Codons | Amino Acids |
|---|---|---|---|---|---|---|---|---|
| accD | 2 | 54239 53462 | CDS CDS | + + | mRNA mRNA | U-to-C C-to-U | UAA=>UCA ACG=>AUG | TERM=>S T=>M |
| atpA | 3 | 10593 11517 10096-11619 | NA NA CDS | + + - | Unanotated Transcript Unanotated Transcript mRNA | U-to-C U-to-C NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| atpB | 2 | 49366-50847 50846 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| atpF | 3 | 12822-12966 11700-12109 12965 | CDS CDS NA | - - + | mRNA mRNA Unanotated Transcript | NA NA C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| atpH | 2 | 13320-13565 13564 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| atpI | 3 | 15073 15005 14328-15074 | NA NA CDS | + + - | Unanotated Transcript Unanotated Transcript mRNA | C-to-U U-to-C NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| chlB | 2 | 4768-6312 6063 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| chlL | 3 | 124995-125897 125174 125896 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| chlN | 1 | 123535-124926 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| infA | 3 | 75097 75151 74975-75217 | NA NA CDS | + + - | Unanotated Transcript Unanotated Transcript mRNA | U-to-C U-to-C NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| matK | 3 | 1417-2916 2661 2655 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| ndhA | 2 | 114132-114689 115632-116189 | CDS CDS | - - | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhB | 2 | 147240-148010 470-1207 | CDS CDS | - - | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhC | 2 | 48001-48363 48003 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhD | 1 | 110113-111621 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| ndhE | 1 | 112335-112637 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| ndhF | 4 | 104084-106324 105964 106323 105688 | CDS NA NA NA | - + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA U-to-C C-to-U U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| ndhG | 2 | 112734-113327 113326 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ndhH | 1 | 116191-117369 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| ndhI | 1 | 113456-113989 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| ndhK | 1 | 47273-48010 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| Novel | 1 | 1206 | NA | + | Unanotated Transcript | C-to-U | NA=>NA | NA=>NA |
| petA | 2 | 57988 57979 | CDS CDS | + + | mRNA mRNA | U-to-C U-to-C | UAA=>UCA UAG=>UCG | TERM=>S TERM=>S |
| petB | 1 | 71562 | CDS | + | mRNA | C-to-U | CGA=>UGA | R=>TERM |
| petD | 2 | 72420-72891 71774-71781 | CDS CDS | + + | mRNA mRNA | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| petN | 2 | 29215-29304 29303 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psaB | 2 | 38848 36645-38849 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psaC | 1 | 111759-112004 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| psbB | 2 | 67508 69031 | CDS CDS | + + | mRNA mRNA | C-to-U C-to-U | ACG=>AUG CAA=>UAA | T=>M Q=>TERM |
| psbC | 1 | 31605-33026 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| psbD | 1 | 33025 | NA | + | Unanotated Transcript | C-to-U | NA=>NA | NA=>NA |
| psbE | 2 | 60069-60320 60269 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psbF | 1 | 59940-60059 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| psbH | 1 | 69747 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| psbI | 1 | 7663 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| psbL | 2 | 59802-59918 59917 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| psbM | 1 | 28245 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| rpl14 | 3 | 76332 75967 75965-76333 | NA NA CDS | + + - | Unanotated Transcript Unanotated Transcript mRNA | C-to-U C-to-U NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rpl16 | 3 | 77801 77794-77802 76618-77022 | NA CDS CDS | + - - | Unanotated Transcript mRNA mRNA | C-to-U NA NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rpl2 | 4 | 80536-80932 79376-79812 79753 80923 | CDS CDS NA NA | - - + + | mRNA mRNA Unanotated Transcript Unanotated Transcript | NA NA U-to-C U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| rpl21 | 1 | 106907 | CDS | + | mRNA | U-to-C | UAA=>UCA | TERM=>S |
| rpl23 | 2 | 81273 81002-81274 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpl36 | 2 | 74843 74731-74844 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpoA | 2 | 73985 73206-74225 | NA CDS | + - | Unanotated Transcript mRNA | U-to-C NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rpoB | 8 | 23373-26588 26462 24857 26360 24905 25871 24158 24008 | CDS NA NA NA NA NA NA NA | - + + + + + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| rpoC1 | 4 | 21357 23208 22891-23322 20521-22185 | NA NA CDS CDS | + + - - | Unanotated Transcript Unanotated Transcript mRNA mRNA | U-to-C U-to-C NA NA | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| rpoC2 | 2 | 20173 16130-20404 | NA CDS | + - | Unanotated Transcript mRNA | U-to-C NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps11 | 2 | 74262-74654 74534 | CDS NA | - + | mRNA Unanotated Transcript | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps14 | 2 | 36425 36124-36426 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps15 | 2 | 117766 117498-117767 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps16 | 3 | 3533-3763 4572-4613 3553 | CDS CDS NA | - - + | mRNA mRNA Unanotated Transcript | NA NA U-to-C | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| rps18 | 1 | 63037 | CDS | + | mRNA | C-to-U | ACG=>AUG | T=>M |
| rps19 | 2 | 79340 79063-79341 | NA CDS | + - | Unanotated Transcript mRNA | C-to-U NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps2 | 4 | 15465 15588 15552 15265-15981 | NA NA NA CDS | + + + - | Unanotated Transcript Unanotated Transcript Unanotated Transcript mRNA | U-to-C U-to-C U-to-C NA | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| rps3 | 2 | 77918-78574 78573 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps4 | 2 | 44156-44776 44775 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| rps7 | 2 | 135935 94033 | NA CDS | + + | Unanotated Transcript mRNA | U-to-C U-to-C | NA=>NA UAA=>UCA | NA=>NA TERM=>S |
| rps8 | 2 | 75355-75753 75752 | CDS NA | - + | mRNA Unanotated Transcript | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| ycf1 | 3 | 118071-123170 122207 123169 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| ycf2 | 8 | 131721 133080 129678 128781 96889 98247 100290 101187 | NA NA NA NA CDS CDS CDS CDS | + + + + + + + + | Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript mRNA mRNA mRNA mRNA | U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA UGA=>UGC UAA=>UCA UAA=>UCA UAA=>UCA | NA=>NA NA=>NA NA=>NA NA=>NA TERM=>C TERM=>S TERM=>S TERM=>S |
| ycf3 | 4 | 41469-41630 43226-43350 42256-42484 42444 | CDS CDS CDS NA | - - - + | mRNA mRNA mRNA Unanotated Transcript | NA NA NA U-to-C | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
( NA = Data Not Available )