sdh3 - Plant Editosome Database - BIG Data Center

Summary

Gene: sdh3
Function: Succinate dehydrogenase
Species: 7
Editing Factors:1 (SlORRM4)
Editing Types:
C-to-U (133)
U-to-C (4)
Editing Events: 141 (C-to-U: 133   NA: 4   U-to-C: 4)
External Link: NCBI Gene
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid
Asclepias syriacaMitochondrion2
NA: 2
85269-85598CDS
CDS
-NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Cucurbita pepoMitochondrion5
C-to-U: 5
619350
619351
619457
619464
619477
CDS
CDS
CDS
CDS
CDS
-
+
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UUC=>UUY
CUC=>YUC
UCC=>UUC
CCA=>UCA
CUC=>CUY
F=>F
L=>L/F
S=>F
P=>S
L=>L
Cycas taitungensisMitochondrion2
C-to-U: 2
240689CDS
CDS
-C-to-U
C-to-U
ACG=>AUG
ACG=>AUG
T=>M
T=>M
Ophioglossum californicumMitochondrion56
C-to-U: 54
U-to-C: 2
182448
182468
182478
182504
182513
182520
182531
182541
182542
182571
182577
182605
182612
182627
182676
182687
182688
182709
182721
182748
182756
182758
182776
182777
182790
182796
182799
182810
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
NAC-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
U-to-C
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
U-to-C
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCG=>UUG
UUC=>UUU
CCU=>CUU
CCG=>CUG
UCA=>UUA
CCC=>UCC
UCG=>UUG
GCG=>GUG
UGA=>CGA
UCC=>UUC
CCA=>UCA
CCG=>UCG
CGU=>UGU
UUC=>UUU
UCA=>UUA
UCA=>UUA
CCG=>UCG
CAU=>UAU
UCG=>UUG
CCC=>UCC
UUC=>UUU
UCC=>UCU
CCA=>UCA
UCC=>UUC
UCA=>UUA
UCC=>UUC
UCA=>UUA
CAC=>UAC
UCA=>UUA
UCG=>UUG
CCC=>UCC
UCG=>UUG
CCU=>CUU
UUC=>UUU
CCG=>CUG
CCA=>UCA
CGU=>UGU
CCG=>UCG
UUC=>UUU
GCG=>GUG
UCC=>UUC
UGA=>CGA
CCC=>UCC
UCG=>UUG
UUC=>UUU
UCA=>UUA
CCG=>UCG
UCA=>UUA
CAU=>UAU
UCA=>UUA
UCA=>UUA
UCC=>UUC
CAC=>UAC
CCA=>UCA
UCC=>UCU
UCC=>UUC
S=>L
F=>F
P=>L
P=>L
S=>L
P=>S
S=>L
A=>V
TERM=>R
S=>F
P=>S
P=>S
R=>C
F=>F
S=>L
S=>L
P=>S
H=>Y
S=>L
P=>S
F=>F
S=>S
P=>S
S=>F
S=>L
S=>F
S=>L
H=>Y
S=>L
S=>L
P=>S
S=>L
P=>L
F=>F
P=>L
P=>S
R=>C
P=>S
F=>F
A=>V
S=>F
TERM=>R
P=>S
S=>L
F=>F
S=>L
P=>S
S=>L
H=>Y
S=>L
S=>L
S=>F
H=>Y
P=>S
S=>S
S=>F
Pleurozia purpureaMitochondrion1
C-to-U: 1
30965CDS+C-to-UCGA=>UGAR=>TERM
Psilotum nudumMitochondrion14
C-to-U: 14
24861
24894
24925
24927
25026
25035
25141
25142
25151
25155
25159
25196
25291
25318
CDS
3'UTR
CDS
CDS
CDS
CDS
3'UTR
CDS
CDS
CDS
CDS
3'UTR
CDS
CDS
NAC-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
NA=>NA
UCC=>UCU
GCC=>GCU
CGU=>UGU
UCA=>UUA
NA=>NA
UCA=>UUA
CCA=>CUA
UUC=>UUU
UCA=>UUA
NA=>NA
CCC=>CUC
CGU=>UGU
S=>L
NA=>NA
S=>S
A=>A
R=>C
S=>L
NA=>NA
S=>L
P=>L
F=>F
S=>L
NA=>NA
P=>L
R=>C
Treubia lacunosaMitochondrion1
C-to-U: 1
32872CDS+C-to-UUAA=>UAATERM=>TERM
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)