rps15 - Plant Editosome Database - BIG Data Center

Summary

Gene: rps15
Function: Ribosomal protein
Species: 42
Editing Types:
C-to-U (35)
Editing Events: 80 (NA: 45   C-to-U: 35)
External Link: NCBI Gene
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid
Asplenium pekinenseChloroplast2
C-to-U: 1
NA: 1
119321-119590
119589
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Asplenium prolongatumChloroplast2
C-to-U: 1
NA: 1
118728-118997
118996
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium anisopterumChloroplast2
C-to-U: 1
NA: 1
119387-119656
119655
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium opacumChloroplast2
C-to-U: 1
NA: 1
119151-119420
119419
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium sheareriChloroplast2
C-to-U: 1
NA: 1
119266-119535
119534
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Athyrium sinenseChloroplast2
C-to-U: 1
NA: 1
119372-119641
119640
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Austroblechnum melanocaulonChloroplast2
C-to-U: 1
NA: 1
118794-119063
119062
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Boulardia latisquamaPlastid1
NA: 1
51462-51731CDS-NANA=>NANA=>NA
Cyrtomium devexiscapulaeChloroplast2
C-to-U: 1
NA: 1
119544-119813
119812
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Cyrtomium falcatumChloroplast2
C-to-U: 1
NA: 1
119661-119930
119929
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Cystopteris chinensisChloroplast2
C-to-U: 1
NA: 1
119347-119616
119615
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Dendrocalamus latiflorusChloroplast2
NA: 2
104159-104431
117974-118246
CDS
CDS
+
-
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Deparia lanceaChloroplast2
C-to-U: 1
NA: 1
119201-119470
119469
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Deparia pycnosoraChloroplast2
C-to-U: 1
NA: 1
119385-119654
119653
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Deparia viridifronsChloroplast2
C-to-U: 1
NA: 1
119181-119450
119449
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplaziopsis cavalerianaChloroplast2
C-to-U: 1
NA: 1
119898-120167
120166
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplaziopsis javanicaChloroplast2
C-to-U: 1
NA: 1
119849-120118
120117
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium bellumChloroplast2
C-to-U: 1
NA: 1
119557-119826
119825
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium dilatatumChloroplast2
C-to-U: 1
NA: 1
119293-119562
119561
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium dushanenseChloroplast2
C-to-U: 1
NA: 1
118871-119140
119139
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium striatumChloroplast2
C-to-U: 1
NA: 1
118920-119189
119188
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplazium unilobumChloroplast2
C-to-U: 1
NA: 1
119466-119735
119734
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Diplopterygium glaucumChloroplast1
NA: 1
128104-128373NA-NANA=>NANA=>NA
Dryopteris decipiensChloroplast2
C-to-U: 1
NA: 1
119184-119453
119452
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Homalosorus pycnocarposChloroplast2
C-to-U: 1
NA: 1
120149-120418
120417
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Hypodematium crenatumChloroplast2
C-to-U: 1
NA: 1
118301-118570
118569
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Lagerstroemia subcostataChloroplast1
NA: 1
122353-122658CDS-NANA=>NANA=>NA
Lepisorus clathratusChloroplast2
C-to-U: 1
NA: 1
121562-121831
121830
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Lonicera japonicaChloroplast1
NA: 1
124945-125220CDS-NANA=>NANA=>NA
Matteuccia struthiopterisChloroplast2
C-to-U: 1
NA: 1
118967-119236
119235
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Medicago hybridaChloroplast1
NA: 1
112126-112368CDS+NANA=>NANA=>NA
Onoclea sensibilisChloroplast2
C-to-U: 1
NA: 1
117498-117767
117766
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Ophioglossum californicumChloroplast2
NA: 2
120383-120643CDS
CDS
-NA
NA
NA=>AUG
NA=>AUG
NA=>M
NA=>M
Pteridium aquilinum subsp. aquilinumChloroplast2
C-to-U: 1
NA: 1
120694-120963
120962
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Rhachidosorus consimilisChloroplast2
C-to-U: 1
NA: 1
120440-120709
120708
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Rhynchoryza subulataPlastid2
NA: 2
102278-102550
115783-116055
CDS
CDS
+
-
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Schizaea elegansChloroplast2
C-to-U: 2
108373
123705
NA
CDS
+C-to-U
C-to-U
NA=>NA
ACG=>AUG
NA=>NA
T=>M
Schizaea pectinataChloroplast2
C-to-U: 2
107535
122077
NA
CDS
+C-to-U
C-to-U
NA=>NA
ACG=>AUG
NA=>NA
T=>M
Takakia lepidozioidesChloroplast1
NA: 1
130047-130313NA-NANA=>NANA=>NA
Woodsia macrochlaenaChloroplast2
C-to-U: 1
NA: 1
119188-119457
119456
NA
CDS
+
-
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Woodsia polystichoidesChloroplast2
C-to-U: 1
NA: 1
118865-119134
119133
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Woodwardia unigemmataChloroplast2
C-to-U: 1
NA: 1
120459-120728
120727
CDS
NA
-
+
NA
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)