rps1 - Plant Editosome Database - BIG Data Center

Summary

Gene: rps1
Function: Ribosomal protein
Species: 8
Editing Factors:1 (EMP21)
Editing Types:
C-to-U (144)
U-to-C (4)
Editing Events: 149 (C-to-U: 144   U-to-C: 4   NA: 1)
External Link: NCBI Gene
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid
Carica papayaMitochondrion1
NA: 1
450343-450945CDS+NANA=>NANA=>NA
Citrullus lanatusMitochondrion1
C-to-U: 1
222473CDS-C-to-UUCC=>UUCS=>F
Cucurbita pepoMitochondrion1
C-to-U: 1
968184CDS+C-to-UUCC=>UUCS=>F
Millettia pinnataMitochondrion4
C-to-U: 4
418012
418369
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
CCU=>CUU
CCU=>CUU
UCA=>UUA
S=>L
P=>L
P=>L
S=>L
Nelumbo nuciferaMitochondrion7
C-to-U: 7
216642
216690
216744
216777
216828
216981
217206
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
UCA=>UUA
UCC=>UUC
CCG=>CUG
CCU=>CUU
ACG=>AUG
CCU=>CUU
S=>L
S=>L
S=>F
P=>L
P=>L
U=>M
P=>L
Ophioglossum californicumMitochondrion56
C-to-U: 54
U-to-C: 2
312784
312833
312877
312958
312959
312967
313247
313280
313292
313333
313529
313636
313637
313685
313726
313727
313728
313735
313736
313739
313800
313809
313956
313980
313987
314051
314074
314081
CDS
5'UTR
CDS
CDS
CDS
5'UTR
5'UTR
CDS
5'UTR
CDS
CDS
CDS
CDS
5'UTR
CDS
5'UTR
3'UTR
CDS
CDS
5'UTR
CDS
CDS
5'UTR
CDS
CDS
CDS
5'UTR
5'UTR
CDS
5'UTR
CDS
5'UTR
CDS
CDS
5'UTR
CDS
5'UTR
CDS
CDS
CDS
5'UTR
CDS
CDS
5'UTR
CDS
CDS
CDS
3'UTR
5'UTR
CDS
5'UTR
CDS
5'UTR
CDS
CDS
5'UTR
NAC-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
U-to-C
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
U-to-C
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCU=>UCU
NA=>NA
UCG=>UUG
CCU=>CUU
UUC=>UUU
NA=>NA
NA=>NA
CCC=>UCC
NA=>NA
UUC=>UUU
UCG=>UUG
UCU=>UUU
CUU=>UUU
NA=>NA
CCU=>CUU
NA=>NA
NA=>NA
UCC=>UUC
UUC=>UUU
NA=>NA
CCA=>UCA
UUC=>UUU
NA=>NA
CUG=>UUG
UCA=>UUA
AGC=>AGU
NA=>NA
NA=>NA
CCU=>CUU
NA=>NA
UUC=>UUU
NA=>NA
CCU=>UCU
UCG=>UUG
NA=>NA
UCU=>UUU
NA=>NA
CUU=>UUU
CCC=>UCC
UUC=>UUU
NA=>NA
UCG=>UUG
UCC=>UUC
NA=>NA
UUC=>UUU
CCA=>UCA
CCU=>CUU
NA=>NA
NA=>NA
UCA=>UUA
NA=>NA
AGC=>AGU
NA=>NA
UUC=>UUU
CUG=>UUG
NA=>NA
P=>S
NA=>NA
S=>L
P=>L
F=>F
NA=>NA
NA=>NA
P=>S
NA=>NA
F=>F
S=>L
S=>F
L=>F
NA=>NA
P=>L
NA=>NA
NA=>NA
S=>F
F=>F
NA=>NA
P=>S
F=>F
NA=>NA
L=>L
S=>L
S=>S
NA=>NA
NA=>NA
P=>L
NA=>NA
F=>F
NA=>NA
P=>S
S=>L
NA=>NA
S=>F
NA=>NA
L=>F
P=>S
F=>F
NA=>NA
S=>L
S=>F
NA=>NA
F=>F
P=>S
P=>L
NA=>NA
NA=>NA
S=>L
NA=>NA
S=>S
NA=>NA
F=>F
L=>L
NA=>NA
Oryza sativa Japonica GroupMitochondrion2
C-to-U: 2
321510
321651
CDS
CDS
-C-to-U
C-to-U
UCA=>UUA
UCC=>UUC
S=>L
S=>F
Psilotum nudumMitochondrion17
C-to-U: 17
94939
95187
95249
95254
95258
95305
95306
95355
95408
95443
95835
95885
95934
95974
96035
96038
96116
CDS
CDS
CDS
3'UTR
CDS
3'UTR
3'UTR
CDS
CDS
CDS
3'UTR
CDS
3'UTR
3'UTR
CDS
CDS
3'UTR
NAC-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CGG=>UGG
CCG=>CUG
UUC=>UUU
NA=>NA
CCA=>CUA
NA=>NA
NA=>NA
CCG=>CUG
UUC=>UUU
UCC=>UUC
NA=>NA
AUC=>AUU
NA=>NA
NA=>NA
CUC=>UUC
ACC=>ACU
NA=>NA
R=>W
P=>L
F=>F
NA=>NA
P=>L
NA=>NA
NA=>NA
P=>L
F=>F
S=>F
NA=>NA
I=>I
NA=>NA
NA=>NA
L=>F
T=>T
NA=>NA
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)