psbB - Plant Editosome Database - BIG Data Center

Summary

Gene: psbB
Function: Photosystem II complex
Species: 49
Editing Types:
C-to-U (97)
U-to-C (22)
Editing Events: 127 (C-to-U: 97   U-to-C: 22   NA: 8)
External Link: NCBI Gene
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid
Adiantum capillus-venerisChloroplast1
NA: 1
67792-69318CDS+NANA=>NANA=>NA
Ampelopteris proliferaChloroplast2
C-to-U: 2
68884
70407
CDS
CDS
+C-to-U
C-to-U
ACG=>AUG
CAA=>UAA
T=>M
Q=>TERM
Anthoceros angustusChloroplast39
C-to-U: 20
U-to-C: 19
91119
91144
91153
91158
91168
91266
91267
91297
91404
91414
91417
91426
91465
91471
91501
91504
91510
91573
91752
91770
91771
91896
91906
91909
91935
92061
92133
92194
92215
92250
92254
92373
92379
92395
92401
92434
92488
92491
92494
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
U-to-C
C-to-U
C-to-U
U-to-C
C-to-U
U-to-C
U-to-C
U-to-C
U-to-C
U-to-C
C-to-U
U-to-C
C-to-U
C-to-U
C-to-U
U-to-C
C-to-U
C-to-U
C-to-U
U-to-C
U-to-C
U-to-C
U-to-C
C-to-U
U-to-C
U-to-C
C-to-U
U-to-C
U-to-C
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
U-to-C
C-to-U
U-to-C
UCG=>UUG
CGG=>UGG
UUU=>UCU
UCU=>UUU
UCA=>UUA
UGU=>CGU
UCU=>UUU
UAA=>CAA
UGU=>CGU
CUU=>CCU
UUA=>UCA
UUU=>UCU
UCU=>UUU
UUA=>CUA
UCC=>UUC
UCC=>UUC
UCA=>UUA
UAA=>CAA
UCA=>UUA
UCA=>UUA
UCU=>UUU
UUU=>UCU
UAU=>CAU
UUU=>CUU
CUU=>CCU
CCA=>CUA
GUA=>GCA
UAC=>CAC
UCG=>UUG
UAU=>CAU
UCA=>CCA
UCC=>UUC
UCU=>UUU
UCU=>UUU
CCA=>CUA
CCA=>CUA
UCA=>CCA
CCU=>CUU
UCA=>CCA
S=>L
R=>W
F=>S
S=>F
S=>L
C=>R
S=>F
TERM=>Q
C=>R
L=>P
L=>S
F=>S
S=>F
L=>L
S=>F
S=>F
S=>L
TERM=>Q
S=>L
S=>L
S=>F
F=>S
Y=>H
F=>L
L=>P
P=>L
V=>A
Y=>H
S=>L
Y=>H
S=>P
S=>F
S=>F
S=>F
P=>L
P=>L
S=>P
P=>L
S=>P
Apopellia endiviifoliaChloroplast2
C-to-U: 2
70717
71009
CDS
CDS
+C-to-U
C-to-U
CGU=>UGU
UCC=>UUC
R=>C
S=>F
Asplenium pekinenseChloroplast2
C-to-U: 2
67543
69066
CDS
CDS
+C-to-U
C-to-U
CAA=>UAA
ACG=>AUG
Q=>TERM
T=>M
Asplenium prolongatumChloroplast2
C-to-U: 2
67827
69350
CDS
CDS
+C-to-U
C-to-U
ACG=>AUG
CAA=>UAA
T=>M
Q=>TERM
Athyrium anisopterumChloroplast2
C-to-U: 2
68464
69987
CDS
CDS
+C-to-U
C-to-U
ACG=>AUG
CAA=>UAA
T=>M
Q=>TERM
Athyrium opacumChloroplast2
C-to-U: 2
68329
69852
CDS
CDS
+C-to-U
C-to-U
CGA=>UGA
ACG=>AUG
R=>TERM
T=>M
Athyrium sheareriChloroplast2
C-to-U: 2
68484
70007
CDS
CDS
+C-to-U
C-to-U
ACG=>AUG
CAG=>UAG
T=>M
Q=>TERM
Athyrium sinenseChloroplast2
C-to-U: 2
68408
69931
CDS
CDS
+C-to-U
C-to-U
CGA=>UGA
ACG=>AUG
R=>TERM
T=>M
Austroblechnum melanocaulonChloroplast1
C-to-U: 1
68599CDS+C-to-UACG=>AUGT=>M
Christella appendiculataChloroplast2
C-to-U: 2
68748
70271
CDS
CDS
+C-to-U
C-to-U
CAA=>UAA
ACG=>AUG
Q=>TERM
T=>M
Cyrtomium devexiscapulaeChloroplast2
C-to-U: 2
68339
69862
CDS
CDS
+C-to-U
C-to-U
CAA=>UAA
ACG=>AUG
Q=>TERM
T=>M
Cyrtomium falcatumChloroplast1
C-to-U: 1
68476CDS+C-to-UACG=>AUGT=>M
Cystopteris chinensisChloroplast1
C-to-U: 1
68591CDS+C-to-UACG=>AUGT=>M
Deparia lanceaChloroplast2
C-to-U: 2
68209
69732
CDS
CDS
+C-to-U
C-to-U
ACG=>AUG
CAA=>UAA
T=>M
Q=>TERM
Deparia pycnosoraChloroplast1
C-to-U: 1
68559CDS+C-to-UACG=>AUGT=>M
Deparia viridifronsChloroplast2
C-to-U: 2
68526
70049
CDS
CDS
+C-to-U
C-to-U
ACG=>AUG
CAA=>UAA
T=>M
Q=>TERM
Diplaziopsis cavalerianaChloroplast2
C-to-U: 2
68971
70494
CDS
CDS
+C-to-U
C-to-U
ACG=>AUG
CAA=>UAA
T=>M
Q=>TERM
Diplaziopsis javanicaChloroplast2
C-to-U: 2
69244
70767
CDS
CDS
+C-to-U
C-to-U
CAA=>UAA
ACG=>AUG
Q=>TERM
T=>M
Diplazium bellumChloroplast2
C-to-U: 2
68494
70017
CDS
CDS
+C-to-U
C-to-U
CAA=>UAA
ACG=>AUG
Q=>TERM
T=>M
Diplazium dilatatumChloroplast2
C-to-U: 2
68400
69923
CDS
CDS
+C-to-U
C-to-U
CAA=>UAA
ACG=>AUG
Q=>TERM
T=>M
Diplazium dushanenseChloroplast2
C-to-U: 2
68433
69956
CDS
CDS
+C-to-U
C-to-U
CAA=>UAA
ACG=>AUG
Q=>TERM
T=>M
Diplazium striatumChloroplast2
C-to-U: 2
67981
69504
CDS
CDS
+C-to-U
C-to-U
CAA=>UAA
ACG=>AUG
Q=>TERM
T=>M
Diplazium unilobumChloroplast2
C-to-U: 2
68416
69939
CDS
CDS
+C-to-U
C-to-U
CAA=>UAA
ACG=>AUG
Q=>TERM
T=>M
Diplopterygium glaucumChloroplast1
NA: 1
85682-87208NA+NANA=>NANA=>NA
Dryopteris decipiensChloroplast2
C-to-U: 2
68484
70007
CDS
CDS
+C-to-U
C-to-U
ACG=>AUG
CAA=>UAA
T=>M
Q=>TERM
Hevea brasiliensisChloroplast1
C-to-U: 1
77439CDS+C-to-UAUC=>AUUI=>I
Homalosorus pycnocarposChloroplast2
C-to-U: 2
69224
70747
CDS
CDS
+C-to-U
C-to-U
ACG=>AUG
CAA=>UAA
T=>M
Q=>TERM
Hymenasplenium unilateraleChloroplast2
C-to-U: 2
69381
70904
CDS
CDS
+C-to-U
C-to-U
CAA=>UAA
ACG=>AUG
Q=>TERM
T=>M
Hypodematium crenatumChloroplast2
C-to-U: 2
68197
69720
CDS
CDS
+C-to-U
C-to-U
ACG=>AUG
CAA=>UAA
T=>M
Q=>TERM
Lepisorus clathratusChloroplast1
C-to-U: 1
67132CDS+C-to-UACG=>AUGT=>M
Macrothelypteris torresianaChloroplast2
C-to-U: 2
68498
70021
CDS
CDS
+C-to-U
C-to-U
CAA=>UAA
ACG=>AUG
Q=>TERM
T=>M
Marsilea crenataChloroplast1
NA: 1
73566-75092CDS+NANA=>NANA=>NA
Matteuccia struthiopterisChloroplast2
C-to-U: 2
67859
69382
CDS
CDS
+C-to-U
C-to-U
ACG=>AUG
CAA=>UAA
T=>M
Q=>TERM
Millettia pinnataChloroplast2
C-to-U: 2
71673CDS
CDS
+C-to-U
C-to-U
GCU=>GUU
GCU=>GUU
A=>V
A=>V
Nothoceros aenigmaticusPlastid2
NA: 2
92807-94333NA
NA
+NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Onoclea sensibilisChloroplast2
C-to-U: 2
67508
69031
CDS
CDS
+C-to-U
C-to-U
CAA=>UAA
ACG=>AUG
Q=>TERM
T=>M
Panicum virgatumChloroplast1
C-to-U: 1
70506CDSNAC-to-UNA=>NAA=>V
Pseudophegopteris auritaChloroplast2
C-to-U: 1
U-to-C: 1
68161
69684
CDS
CDS
+C-to-U
U-to-C
ACG=>AUG
CAA=>CAA
T=>M
Q=>Q
Pteridium aquilinum subsp. aquilinumChloroplast1
C-to-U: 1
70212CDS+C-to-UACG=>AUGT=>M
Rhachidosorus consimilisChloroplast2
C-to-U: 2
69256
70779
CDS
CDS
+C-to-U
C-to-U
ACG=>AUG
CGA=>UGA
T=>M
R=>TERM
Schizaea elegansChloroplast2
C-to-U: 1
U-to-C: 1
60907
62370
CDS
CDS
+U-to-C
C-to-U
UAA=>CAA
ACG=>AUG
TERM=>Q
T=>M
Schizaea pectinataChloroplast2
C-to-U: 1
U-to-C: 1
58674
60137
CDS
CDS
+C-to-U
U-to-C
ACG=>AUG
UAA=>CAA
T=>M
TERM=>Q
Stegnogramma sagittifoliaChloroplast2
C-to-U: 2
68286
69809
CDS
CDS
+C-to-U
C-to-U
CAA=>UAA
ACG=>AUG
Q=>TERM
T=>M
Takakia lepidozioidesChloroplast1
NA: 1
91465-92991NA+NANA=>NANA=>NA
Woodsia macrochlaenaChloroplast2
C-to-U: 2
68397
69920
CDS
CDS
+C-to-U
C-to-U
CAA=>UAA
ACG=>AUG
Q=>TERM
T=>M
Woodsia polystichoidesChloroplast2
C-to-U: 2
68115
69638
CDS
CDS
+C-to-U
C-to-U
CAA=>UAA
ACG=>AUG
Q=>TERM
T=>M
Woodwardia unigemmataChloroplast2
C-to-U: 2
68409
69932
CDS
CDS
+C-to-U
C-to-U
CAA=>UAA
ACG=>AUG
Q=>TERM
T=>M
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)