| Gene: | petD |
| Function: | Cytochrome b6/f complex |
| Species: | 47 |
| Editing Types: |
|
| Editing Events: | 115 (NA: 79 C-to-U: 23 U-to-C: 13) |
| External Link: | NCBI Gene |
| Species | Organelle | Editing Events | Editing Types | Genomic Position | Region | Strand | Type | Codons | Amino Acid |
|---|---|---|---|---|---|---|---|---|---|
| Adiantum capillus-veneris | Chloroplast | 2 | NA: 2 | 72028-72035 72677-73148 | CDS CDS | + | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Alsophila spinulosa | Chloroplast | 2 | NA: 2 | 76017-76024 76751-77225 | CDS CDS | + | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Ampelopteris prolifera | Chloroplast | 2 | NA: 2 | 73124-73132 73784-74254 | CDS CDS | + | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Anthoceros angustus | Chloroplast | 22 | C-to-U: 10 U-to-C: 12 | 96130 96172 96189 96190 96193 96195 96202 96204 96205 96298 96337 96339 96346 96348 96397 96433 96444 96450 96482 96483 96484 96564 | CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS | + | C-to-U U-to-C U-to-C C-to-U C-to-U U-to-C U-to-C U-to-C U-to-C C-to-U U-to-C C-to-U U-to-C U-to-C U-to-C C-to-U U-to-C C-to-U U-to-C C-to-U C-to-U C-to-U | UCU=>UUU GUU=>GCU UUA=>UCA CAU=>UAU GCU=>GUU UAA=>CAA UCG=>CCG CUU=>CCU UUA=>CUA CCG=>UCG UGU=>CGU UCU=>UUU CUU=>CCU UAA=>CAA UCU=>CCU CAA=>UAA UUU=>UUC CCG=>CUG CUU=>CCU UCA=>UUA UCU=>UUU CCC=>CUC | S=>F V=>A L=>S H=>Y A=>V TERM=>Q S=>P L=>P L=>L P=>S C=>R S=>F L=>P TERM=>Q S=>P Q=>TERM F=>F P=>L L=>P S=>L S=>F P=>L |
| Asplenium pekinense | Chloroplast | 1 | C-to-U: 1 | 71746 | CDS | + | C-to-U | ACG=>AUG | T=>M |
| Asplenium prolongatum | Chloroplast | 1 | U-to-C: 1 | 72009 | CDS | + | U-to-C | AUU=>AUC | I=>I |
| Athyrium opacum | Chloroplast | 2 | NA: 2 | 72583-72587 73233-73704 | CDS CDS | + | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Athyrium sheareri | Chloroplast | 2 | NA: 2 | 72723-72727 73370-73841 | CDS CDS | + | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Athyrium sinense | Chloroplast | 2 | NA: 2 | 72670-72677 73316-73787 | CDS CDS | + | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Austroblechnum melanocaulon | Chloroplast | 2 | NA: 2 | 72821-72828 73464-73935 | CDS CDS | + | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Cyrtomium devexiscapulae | Chloroplast | 1 | C-to-U: 1 | 72599 | CDS | + | C-to-U | ACG=>AUG | T=>M |
| Cyrtomium falcatum | Chloroplast | 1 | C-to-U: 1 | 72743 | CDS | + | C-to-U | ACG=>AUG | T=>M |
| Cystopteris chinensis | Chloroplast | 2 | NA: 2 | 72855-72859 73505-73976 | CDS CDS | + | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Deparia lancea | Chloroplast | 1 | C-to-U: 1 | 72486 | CDS | + | C-to-U | ACG=>AUG | T=>M |
| Deparia pycnosora | Chloroplast | 1 | C-to-U: 1 | 72804 | CDS | + | C-to-U | ACG=>AUG | T=>M |
| Deparia viridifrons | Chloroplast | 1 | C-to-U: 1 | 72781 | CDS | + | C-to-U | ACG=>AUG | T=>M |
| Diplaziopsis cavaleriana | Chloroplast | 2 | NA: 2 | 73200-73207 73846-74317 | CDS CDS | + | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Diplaziopsis javanica | Chloroplast | 2 | NA: 2 | 73471-73475 74117-74588 | CDS CDS | + | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Diplazium bellum | Chloroplast | 2 | NA: 2 | 72741-72748 73392-73863 | CDS CDS | + | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Diplazium dilatatum | Chloroplast | 2 | NA: 2 | 72646-72653 73303-73774 | CDS CDS | + | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Diplazium dushanense | Chloroplast | 2 | NA: 2 | 72677-72684 73330-73801 | CDS CDS | + | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Diplazium striatum | Chloroplast | 2 | NA: 2 | 72225-72232 72880-73351 | CDS CDS | + | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Diplazium unilobum | Chloroplast | 2 | NA: 2 | 72641-72648 73295-73766 | CDS CDS | + | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Dryopteris decipiens | Chloroplast | 1 | C-to-U: 1 | 72685 | CDS | + | C-to-U | ACG=>AUG | T=>M |
| Hevea brasiliensis | Chloroplast | 1 | C-to-U: 1 | 82437 | CDS | + | C-to-U | CAA=>UAA | Q=>TERM |
| Homalosorus pycnocarpos | Chloroplast | 2 | NA: 2 | 73474-73478 74120-74591 | CDS CDS | + | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Hymenasplenium unilaterale | Chloroplast | 2 | NA: 2 | 73650-73654 74293-74764 | CDS CDS | + | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Hypodematium crenatum | Chloroplast | 2 | NA: 2 | 72373-72377 73027-73498 | CDS CDS | + | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Iochroma stenanthum | Chloroplast | 1 | NA: 1 | 80391-80873 | CDS | + | NA | NA=>NA | NA=>NA |
| Isoetes flaccida | Chloroplast | 2 | NA: 2 | 8719-9193 9879-9886 | CDS CDS | - | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Lepisorus clathratus | Chloroplast | 1 | C-to-U: 1 | 71384 | CDS | + | C-to-U | ACG=>AUG | T=>M |
| Macrothelypteris torresiana | Chloroplast | 2 | NA: 2 | 72751-72755 73411-73882 | CDS CDS | + | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Matteuccia struthiopteris | Chloroplast | 2 | NA: 2 | 72107-72114 72754-73225 | CDS CDS | + | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Myriopteris lindheimeri | Chloroplast | 1 | C-to-U: 1 | 74035 | CDS | + | C-to-U | CAG=>UAG | Q=>TERM |
| Nothoceros aenigmaticus | Plastid | 6 | NA: 6 | 97114-97121 97114-98228 97754-98228 | Exon NA NA Exon Exon Exon | + | NA NA NA NA NA NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| Onoclea sensibilis | Chloroplast | 2 | NA: 2 | 71774-71781 72420-72891 | CDS CDS | + | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Ophioglossum californicum | Chloroplast | 4 | NA: 4 | 89310-89317 90030-90504 | CDS CDS CDS CDS | + | NA NA NA NA | NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA |
| Pelargonium alternans | Chloroplast | 1 | C-to-U: 1 | 90566 | CDS | + | C-to-U | GCA=>GUA | A=>V |
| Piper cenocladum | Chloroplast | 2 | NA: 2 | 80053-80058 80462-80935 | CDS CDS | + | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Pseudophegopteris aurita | Chloroplast | 2 | NA: 2 | 72406-72413 73063-73534 | CDS CDS | + | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Rhachidosorus consimilis | Chloroplast | 2 | NA: 2 | 73515-73522 74159-74630 | CDS CDS | + | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Schizaea elegans | Chloroplast | 1 | C-to-U: 1 | 65165 | CDS | + | C-to-U | ACG=>AUG | T=>M |
| Schizaea pectinata | Chloroplast | 1 | C-to-U: 1 | 62929 | CDS | + | C-to-U | ACG=>AUG | T=>M |
| Stegnogramma sagittifolia | Chloroplast | 2 | NA: 2 | 72542-72546 73199-73670 | CDS CDS | + | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Takakia lepidozioides | Chloroplast | 2 | NA: 2 | 95431-95438 96171-96645 | NA NA | + | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Woodsia macrochlaena | Chloroplast | 2 | NA: 2 | 72655-72659 73290-73761 | CDS CDS | + | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Woodsia polystichoides | Chloroplast | 2 | NA: 2 | 72371-72375 73008-73479 | CDS CDS | + | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Species | Organelle | Editing Events | Editing Types | Genomic Position | Region | Strand | Type | Codons | Amino Acid |
( NA = Data Not Available )