ccmC - Plant Editosome Database - BIG Data Center

Summary

Gene: ccmC
Function: Cytochrome c biogenesis protein
Species: 14
Editing Factors:19 (CWM1, CWM2, DYW2, EMP21, MEF11, MEF37, MEF47, MEF8, MORF1, MORF8, NUWA, OGR1, ORRM2, ORRM3, ORRM4, OTP90, PGN, PPR756, SlORRM4)
Editing Types:
C-to-U (462)
Editing Events: 467 (C-to-U: 462   NA: 5)
External Link: NCBI Gene
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid
Anomodon rugeliiMitochondrion1
C-to-U: 1
15823CDS+C-to-UCAA=>UAAQ=>TERM
Asclepias syriacaMitochondrion2
NA: 2
226017-226733CDS
CDS
+NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Batis maritimaMitochondrion1
NA: 1
223186-223884CDS-NANA=>NANA=>TERM
Brachythecium rivulareMitochondrion1
C-to-U: 1
15825CDS+C-to-UCAA=>UAAQ=>TERM
Brassica napusMitochondrion50
C-to-U: 50
212650
212726
212731
212878
212928
212942
212947
212968
212983
212993
213005
213010
213014
213020
213044
213068
213095
213115
213122
213155
213161
213165
213166
213171
213197
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCG=>UUG
CGU=>UGU
CCG=>CUG
UCA=>UUA
CCC=>CUC
CCU=>UCU
CAU=>UAU
CGU=>UGU
GCU=>GUU
CCU=>CUU
ACC=>ACU
CCC=>CUC
UCG=>UUG
AUC=>AUU
CGU=>UGU
CCU=>UCU
CGG=>UGG
UCU=>UUU
GCG=>GUG
CCC=>CUC
UCU=>UUU
ACC=>ACU
CUU=>UUU
CCG=>CUG
UCA=>UUA
CCU=>CUU
CGG=>UGG
CCG=>CUG
UCA=>UUA
CGU=>UGU
GCU=>GUU
CCU=>UCU
UCU=>UUU
CCU=>UCU
UCG=>UUG
CGU=>UGU
CGU=>UGU
CUU=>UUU
ACC=>ACU
CCC=>CUC
CAU=>UAU
UCU=>UUU
ACC=>ACU
UCA=>UUA
CGG=>UGG
GCG=>GUG
UCG=>UUG
CGG=>UGG
AUC=>AUU
CCG=>CUG
S=>L
R=>C
P=>L
S=>L
P=>L
P=>S
H=>Y
R=>C
A=>V
P=>L
T=>T
P=>L
S=>L
I=>I
R=>C
P=>S
R=>W
S=>F
A=>V
P=>L
S=>F
T=>T
L=>F
P=>L
S=>L
P=>L
R=>W
P=>L
S=>L
R=>C
A=>V
P=>S
S=>F
P=>S
S=>L
R=>C
R=>C
L=>F
T=>T
P=>L
H=>Y
S=>F
T=>T
S=>L
R=>W
A=>V
S=>L
R=>W
I=>I
P=>L
Citrullus lanatusMitochondrion18
C-to-U: 18
363190
363200
363205
363217
363227
363242
363263
363264
363268
363332
363382
363411
363479
363484
363548
363560
363587
363618
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CGG=>UGG
CGG=>YGG
UCA=>UYA
CAU=>YAU
ACA=>AUA
CGU=>UGU
CCU=>UCU
ACC=>ACU
CCG=>CUG
CCG=>CUG
CGG=>UGG
UUC=>UUY
CGU=>UGU
CUU=>YUU
UCG=>UUG
CGG=>YGG
CCC=>CCY
GCG=>GUG
R=>W
R=>R/W
S=>S/L
H=>H/Y
T=>I
R=>C
P=>S
T=>T
P=>L
P=>L
R=>W
F=>F
R=>C
L=>L/F
S=>L
R=>R/W
P=>P
A=>V
Cucurbita pepoMitochondrion18
C-to-U: 18
473450
473477
473489
473553
473558
473626
473655
473705
473769
473773
473774
473810
473820
473832
473837
473847
473895
473922
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCG=>UUG
UCG=>UUG
CCC=>CCY
CCU=>YCU
ACA=>AUA
CAU=>YAU
UCA=>UUA
UUC=>UUY
CGG=>YGG
CGG=>YGG
CCG=>CUG
CUU=>YUU
CCG=>CUG
UCU=>UUU
CGU=>UGU
GCG=>GYG
CGG=>YGG
CGG=>UGG
S=>L
S=>L
P=>P
P=>P/S
T=>I
H=>H/Y
S=>L
F=>F
R=>R/W
R=>R/W
P=>L
L=>L/F
P=>L
S=>F
R=>C
A=>A/V
R=>R/W
R=>W
Ginkgo bilobaMitochondrion29
C-to-U: 29
141520
141540
141567
141580
141585
141587
141589
141615
141625
141630
141637
141642
141669
141678
141688
141689
141693
141730
141757
141774
141789
141820
141822
141852
141858
141886
141891
141904
141954
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCU=>UUU
CCG=>CUG
CGG=>UGG
CCC=>CCU
GCC=>GUC
CGG=>UGG
CCG=>CUG
CCU=>UCU
UUC=>UUU
CCG=>CUG
UCA=>UUA
CGU=>UGU
CCU=>UCU
CCU=>CUU
CCG=>CUG
CCG=>CUG
UCU=>UUU
CUU=>UUU
UCG=>UUG
UCU=>UUU
CGG=>UGG
UCU=>UUU
CCC=>UCC
CCC=>UCC
CAU=>UAU
UCG=>UUG
UCA=>UUA
CGG=>UGG
CCA=>CUA
S=>F
P=>L
R=>W
P=>P
A=>V
R=>W
P=>L
P=>S
F=>F
P=>L
S=>L
R=>C
P=>S
P=>L
P=>L
P=>L
S=>F
L=>F
S=>L
S=>F
R=>W
S=>F
P=>S
P=>S
H=>Y
S=>L
S=>L
R=>W
P=>L
Lotus japonicusMitochondrion56
C-to-U: 56
342296
342323
342335
342353
342399
342404
342501
342551
342615
342620
342641
342656
342666
342671
342678
342683
342687
342693
342717
342768
342788
342795
342828
342834
342839
342844
342870
342893
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCU=>CUU
CCG=>CUG
CGG=>UGG
UCU=>UUU
CUG=>UUG
UCG=>UUG
CCU=>UCU
CGG=>UGG
CGU=>UGU
CCC=>CUC
UCA=>UUA
CCC=>CUC
CGG=>UGG
UCU=>UUU
CCG=>CUG
CAU=>UAU
CCU=>UCU
ACA=>AUA
CGU=>UGU
AUC=>AUU
UCA=>UUA
CUU=>UUU
GCG=>GUG
CCU=>UCU
CGG=>UGG
CGU=>UGU
CCU=>UCU
GCU=>GUU
CGG=>UGG
CUG=>UUG
UCG=>UUG
CCU=>CUU
CCU=>UCU
CCG=>CUG
UCU=>UUU
UCA=>UUA
CGG=>UGG
CGG=>UGG
UCU=>UUU
CGU=>UGU
CCC=>CUC
CCC=>CUC
CCU=>UCU
CGU=>UGU
AUC=>AUU
CCG=>CUG
UCA=>UUA
CAU=>UAU
ACA=>AUA
CCU=>UCU
CGU=>UGU
CCU=>UCU
CUU=>UUU
GCU=>GUU
GCG=>GUG
CGG=>UGG
P=>L
P=>L
R=>W
S=>F
L=>L
S=>L
P=>S
R=>W
R=>C
P=>L
S=>L
P=>L
R=>W
S=>F
P=>L
H=>Y
P=>S
T=>I
R=>C
I=>I
S=>L
L=>F
A=>V
P=>S
R=>W
R=>C
P=>S
A=>V
R=>W
L=>L
S=>L
P=>L
P=>S
P=>L
S=>F
S=>L
R=>W
R=>W
S=>F
R=>C
P=>L
P=>L
P=>S
R=>C
I=>I
P=>L
S=>L
H=>Y
T=>I
P=>S
R=>C
P=>S
L=>F
A=>V
A=>V
R=>W
Millettia pinnataMitochondrion56
C-to-U: 56
264128
264151
264177
264182
264187
264193
264226
264233
264253
264304
264328
264334
264338
264343
264350
264355
264365
264380
264401
264406
264470
264520
264617
264622
264668
264686
264698
264725
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCU=>UCU
UCG=>UUG
UCU=>UUU
GCU=>GUU
CGG=>UGG
CUG=>UUG
CAU=>UAU
CCC=>CUC
GCG=>GUG
CGU=>UGU
CCU=>UCU
CGG=>UGG
CCG=>CUG
CCU=>CUU
UCA=>UUA
CGG=>UGG
UCU=>UUU
ACA=>AUA
AUC=>AUU
CUU=>UUU
CCC=>CUC
CCU=>UCU
CGU=>UGU
CCU=>UCU
UCA=>UUA
CCU=>UCU
CGG=>UGG
CCG=>CUG
CUG=>UUG
CGG=>UGG
CAU=>UAU
UCG=>UUG
CCU=>UCU
UCU=>UUU
GCU=>GUU
CGG=>UGG
CCU=>UCU
CCG=>CUG
CCU=>CUU
GCG=>GUG
CCC=>CUC
CGU=>UGU
ACA=>AUA
CUU=>UUU
CCC=>CUC
CGG=>UGG
UCA=>UUA
UCU=>UUU
AUC=>AUU
CCU=>UCU
UCA=>UUA
CGG=>UGG
CCU=>UCU
CCG=>CUG
CGU=>UGU
CCU=>UCU
P=>S
S=>L
S=>F
A=>V
R=>W
L=>L
H=>Y
P=>L
A=>V
R=>C
P=>S
R=>W
P=>L
P=>L
S=>L
R=>W
S=>F
T=>I
I=>I
L=>F
P=>L
P=>S
R=>C
P=>S
S=>L
P=>S
R=>W
P=>L
L=>L
R=>W
H=>Y
S=>L
P=>S
S=>F
A=>V
R=>W
P=>S
P=>L
P=>L
A=>V
P=>L
R=>C
T=>I
L=>F
P=>L
R=>W
S=>L
S=>F
I=>I
P=>S
S=>L
R=>W
P=>S
P=>L
R=>C
P=>S
Oryza sativa Japonica GroupMitochondrion35
C-to-U: 35
60460
60468
60477
60483
60509
60514
60519
60525
60558
60565
60585
60612
60634
60636
60660
60666
60670
60675
60682
60687
60697
60712
60715
60733
60775
60802
60834
60897
60906
60949
60954
60972
61018
61030
61057
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
GCG=>GUG
CCG=>CUG
CCA=>CUA
CGU=>UGU
UCU=>UUU
UCG=>UUG
CGG=>UGG
CCU=>UCU
CGG=>UGG
CCA=>CUA
CGU=>UGU
CCG=>CUG
GCU=>GUU
CGG=>UGG
CAU=>UAU
CUG=>UUG
CCC=>UCC
UCC=>UUC
UCA=>UUA
CCU=>CUU
UCU=>UUU
CCA=>UCA
CCC=>CUC
CCU=>UCU
UCU=>UUU
CCC=>CUC
CGG=>UGG
UCG=>UUG
UCU=>UUU
AUC=>AUU
CUU=>UUU
CCU=>UCU
CGG=>UGG
CGU=>UGU
CCC=>CUC
A=>V
P=>L
P=>L
R=>C
S=>F
S=>L
R=>W
P=>S
R=>W
P=>L
R=>C
P=>L
A=>V
R=>W
H=>Y
L=>L
P=>S
S=>F
S=>L
P=>L
S=>F
P=>S
P=>L
P=>S
S=>F
P=>L
R=>W
S=>L
S=>F
I=>I
L=>F
P=>S
R=>W
R=>C
P=>L
Psilotum nudumMitochondrion35
C-to-U: 35
63692
63693
63729
63740
63752
63753
63761
63773
63792
63799
63800
63840
63849
63875
63885
63887
63890
63947
63953
63966
63990
64034
64049
64072
64146
64150
64151
64154
64235
64236
64245
64262
64269
64334
64337
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
NAC-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCC=>UCC
CGG=>UGG
UCU=>UUU
UCU=>UUU
UCU=>UUU
CUC=>CUU
UCA=>UUA
CCA=>UCA
UUC=>UUU
CGU=>UGU
UCC=>UUC
CAU=>UAU
UCG=>UUG
CGG=>UGG
CCU=>UCU
UCA=>UUA
UCA=>UUA
UCU=>UUU
CAU=>UAU
CGG=>UGG
UCA=>UUA
CCA=>UCA
CCG=>CUG
UCA=>UUA
CCU=>UCU
CCU=>UCU
UCC=>UUC
UCG=>UUG
CCC=>CUC
UCG=>UUG
CGG=>UGG
ACA=>AUA
ACC=>ACU
UCA=>UUA
CCU=>CUU
P=>S
R=>W
S=>F
S=>F
S=>F
L=>L
S=>L
P=>S
F=>F
R=>C
S=>F
H=>Y
S=>L
R=>W
P=>S
S=>L
S=>L
S=>F
H=>Y
R=>W
S=>L
P=>S
P=>L
S=>L
P=>S
P=>S
S=>F
S=>L
P=>L
S=>L
R=>W
T=>I
T=>T
S=>L
P=>L
Tetraplodon fuegianusMitochondrion1
C-to-U: 1
15361CDS+C-to-UCAA=>UAAQ=>TERM
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)