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About Coronavirus
Released Genome Sequences
China National Center for Bioinformation|
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Eleven complete genome sequences of 2019-nCov submitted by Beijing Institute of Microbiology and Epidemiology have been shared with NCBI (accession numbers MT291826~ MT291836) through CNCB/NGDC. (2020-04-07)
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One complete genome sequence of 2019-nCov submitted by Fuyang City Center for Disease Control and Prevention has been shared with NCBI (accession number MT281577) through CNCB/NGDC. (2020-04-07)
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Six complete genome sequences of 2019-nCov submitted by Wuhan Institute of Virology, Chinese Academy of Sciences have been shared with NCBI (accession numbers MT259226~MT259231) through CNCB/NGDC. (2020-03-31)
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The first complete genome sequence of SARS-CoV-2 from Pakistan, submitted by National University of Sciences and Technology, Pakistan has been released in CNCB/NGDC (GWHACDD01000000) and NCBI (MT240479). (2020-03-25)
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| Historical haplotype maps are built for each sample collection date and automatically reconstructed with new sequence data. They can help users to track the progress of genome mutations. |
| 2019 Novel Coronavirus Resource was published in YiChuan. |
| Five complete genome sequences of 2019-nCoV submitted by Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College have been shared with NCBI (accession numbers MT019529~MT019533) through CNCB/ NGDC. |
Haplotype maps of novel coronavirus across the whole world and China are constructed, respectively, based on the genome variation information obtained from available high-quality genome sequences.
View Realtime Graph
Phylogeny tree of novel coronavirus across the whole world are constructed using BEAST, based on the genome variation information obtained from available high-quality genome sequences.
View Realtime Graph
Combining the mutation information of S gene and the structure information of S protein to annotated the position of the mutation site causing amino acid change in the protein structure.
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This work was developed and maintained by China National Center for Bioinformation (CNCB) / National Genomics Data Center (NGDC), and supported by the 13th Five-year Informatization Plan of Chinese Academy of Sciences (No. XXH13505-05), the Strategic Priority Research Program of the Chinese Academy of Sciences (XDA19090116，XDA08020102), the Genomics Data Center Construction of Chinese Academy of Sciences (0202), the Youth Innovation Promotion Association of Chinese Academy of Sciences and CAS Key Technology Talent Program.
China National Center for Bioinformation (CNCB) / Beijing Institute of Genomics, Chinese Academy of Sciences
(BIG)
National Gemomics Data Center (NGDC) / BIG Data Center
(BIGD)
Email: GWH@big.ac.cn
Telephone: +86 (10) 8409-7340
Fax: +86 (10) 8409-7200
Address: No.1 Beichen West Road, Chaoyang District, Beijing 100101, China
The genome sequences of 3 novel coronavirus strains, Wuhan-Hu-1, WHU01 and WHU02 are re-assembled using raw sequencing data. Sequence comparison and colinearity analyses show that the newly assembled sequences are nearly identical to the released genome sequences, indicating the accuracy of the genome sequences. In addition, compared with strain Wuhan-Hu-1, WHU01 and WHU02 lack short sequences at both ends of the genome, mainly due to the different repeat number of nucleotide ‘A’ in terminal noncoding regions.
NGDC