Resources

LncRNAs

268,848 LncRNAs

Featured LncRNAs

1,867 Functional LncRNAs

Function

3,762 LncRNA-Function Associations

Diseases

3,772 Validated Associations 97,998 Predicted LncRNAs

Expression

819 HK LncRNAs
49,115 TS LncRNAs

Methylation

Profiles in 9 Cancers

Variation

92,725,757 SNPs

Interaction

128,014,198 LncRNA-miRNA Interactions

Tools

BLAST

Search By Sequence

LGC

Coding Potential Prediction

Classification

Genomic Location Annotation

Conversion

LncRNA ID Conversion

Publications

  • LncBook: a curated knowledgebase of human long non-coding RNAs. Nucleic Acids Res 2019. [PMID=30329098]

  • Related publications:

    • Community curation and expert curation of human long noncoding RNAs with LncRNAWiki and LncBook. Curr Protoc Bioinformatics 2019.
    • Database Resources of the BIG Data Center in 2019. Nucleic Acids Res 2019. [PMID=30365034]
    • LncRNAWiki: harnessing community knowledge in collaborative curation of human long non-coding RNAs. Nucleic Acids Res 2015. [PMID=25399417]

    News and Update

    08/29/2019 - version 1.0

    • To facilitate overall investigation of various RNAs, a comprehensive RNA reference dataset was created, including lncRNA annotations from LncBook and other RNAs’annotations derived from GENCODE v31.
    • Both hg19 (GRCh37) and GRCh38 versions were provided, which are freely available in the download page.

    07/02/2019 - version 1.0

    • 1196 redundant lncRNA transcripts removed
    • Genomic annotations of 1046 lncRNA transcripts updated
    • Erroneous gene locations corrected
    • Data imported to RNAcentral release 12
    • TS lncRNAs of specific tissues can be accessed in expression page
    • Protocol paper published in Current Protocols in Bioinformatics

    Global Visitors

    Last update: July 2019 (version 1.0)