- Scientific Name
- Prochlorococcus marinus
- Common Names
- -
- Bioproject
- PRJCA002394
- Biosample
- SAMC147135
- Accession No.
- GWHACBQ00000000
- GWH reannotation accession
- GWHRA_ACBQ00000000.1
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- College of Marine Science and Technology, China University of Geosciences, Wuhan
- Contact
- Wei Yan, yanwei@cug.edu.cn
- Sequence author(s)
- Wei Yan, Xuejin Feng, Wei Zhang
- Released Date
- 2021-01-05
- Assembly Level
- Draft genome in contig level
- Genome Representation
- Full Genome
- Assembly method
- SPAdes v.3.11.1
- Sequencing & coverage
- Illumina HiSeq 4000 200.0
- Download
-
DNA
Reannotation DNA Reannotation GFF Reannotation RNA Reannotation Protein - Publication(s) -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHACBQ00000000 | GWHRA_ACBQ00000000.1 | bin | Draft genome in contig level | 2021-01-05 |
DNA
Reannotation DNA Reannotation GFF Reannotation RNA Reannotation Protein |
Statistics of Genome Assembly
| Genome size (bp) | 1,673,779 |
| GC content | 31.00% |
| Contig sequence No. | 6 |
| Maximum contig sequence length (bp) | 746,610 |
| Minimum contig sequence length (bp) | 74,912 |
| Average contig sequence length (bp) | 278,963 |
| Contig N50 (bp) | 355,646 |
| Contig N90 (bp) | 195,376 |
Statistics of Genome Assembly
| Genome size (bp) | 1,673,779 |
| GC content | 31.00% |
| Contig sequence No. | 6 |
| Maximum contig sequence length (bp) | 746,610 |
| Minimum contig sequence length (bp) | 74,912 |
| Average contig sequence length (bp) | 278,963 |
| Contig N50 (bp) | 355,646 |
| Contig N90 (bp) | 195,376 |
Annotation of Whole Genome Assembly
| Protein | tRNA | rRNA | ncRNA | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 1,868 | 37 | 3 | 1 | 8 | 9 | 1,926 |