Scientific Name
Aurantiochytrium limacinum
Common Names
-
Bioproject
PRJCA002304
Biosample
SAMC139532
Accession No.
GWHABLC00000000
Submitter Organization
Fujian Normal University, Fujian Normal University
Contact
Ting Xue, xueting@fjnu.edu.cn
Sequence author(s)
Ting Xue
Released Date
2020-03-17
Assembly Level
Draft genome in scaffold level
Genome Representation
Full Genome
Reference Genome
yes
Assembly method
Canu 1.6
Sequencing & coverage
PacBio 150.0
Download
DNA GFF RNA Protein
Publication(s)
Ting Xue. Genome and transcriptome analyses provide insight into the omega-3 long-chain polyunsaturated fatty acids biosynthesis of Schizochytrium limacinum SR21. Frontiers in Microbiology. 2020.
Assembly Accession Assembly Name Assembly Level Release Date Download Files
GWHABLC00000000 Schizochytrium limacinum SR21 Draft genome in scaffold level 2020-03-17 DNA GFF RNA Protein

Statistics of Genome Assembly

Genome size (bp) 63,006,391
GC content 44.99%
Scaffold sequence No. 52
Maximum scaffold sequence length (bp) 4,017,426
Minimum scaffold sequence length (bp) 9,409
Average scaffold sequence length (bp) 1,211,661
Scaffold N50 (bp) 2,674,831
Scaffold N90 (bp) 1,478,357
Annotation of Whole Genome Assembly
Protein Total
Total 6,834 6,834