- Scientific Name
- Enterococcus thailandicus
- Common Names
- Enterococcus sanguinicola
- Bioproject
- PRJCA002161
- Biosample
- SAMC133234
- Accession No.
- GWHABKQ00000000
- GWH reannotation accession
- GWHRA_ABKQ00000000.1
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Microbiology and immunology, Shanghai Jiao Tong University
- Contact
- Tinghua Li, 15000023813@163.com
- Sequence author(s)
- Tinghua Li, XiaoKui Guo, YongZhang Zhu
- Released Date
- 2021-01-05
- Assembly Level
- Complete genome
- Genome Representation
- Full Genome
- Assembly method
- Newbler 2.5.2
- Sequencing & coverage
- PacBio 42.0
Illumina HiSeq 4000 190.0 - Download
-
DNA
GFF
RNA
Protein
Reannotation DNA Reannotation GFF Reannotation RNA Reannotation Protein - Publication(s) -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHABKQ00000000 | GWHRA_ABKQ00000000.1 | d5B_assembly | Complete genome | 2021-01-05 |
DNA
GFF
RNA
Protein
Reannotation DNA Reannotation GFF Reannotation RNA Reannotation Protein |
Statistics of Genome Assembly
| Genome size (bp) | 2,876,033 |
| GC content | 36.72% |
| Chromosomes sequence No. | 1 |
| Plasmids sequence No. | 1 |
Annotation of Whole Genome Assembly
| Protein | tRNA | rRNA | Others | Total | |
|---|---|---|---|---|---|
| Chromosome | 2,535 | 67 | 18 | 80 | 2,700 |
| Plasmid | 100 | 0 | 0 | 4 | 104 |
| Total | 2,635 | 67 | 18 | 84 | 2,804 |
Annotation Details
| ChrID | Protein | tRNA | rRNA | Others | Total |
|---|---|---|---|---|---|
| chr1 | 2,535 | 67 | 18 | 80 | 2,700 |
| p1 | 100 | 0 | 0 | 4 | 104 |
| Total | 2,635 | 67 | 18 | 84 | 2,804 |
Statistics of Genome Assembly
| Genome size (bp) | 2,876,033 |
| GC content | 36.72% |
| Chromosomes sequence No. | 1 |
| Plasmids sequence No. | 1 |
Annotation of Whole Genome Assembly
| Protein | tRNA | rRNA | ncRNA | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 96 | 0 | 0 | 0 | 7 | 1 | 104 |