Scientific Name
unclassified Rhizobium/Agrobacterium group
Common Names
-
Bioproject
PRJCA002122
Biosample
SAMC130650
Accession No.
GWHABKA00000000
GWH reannotation accession
GWHRA_ABKA00000000.1
GSA raw reads
-
GVM variations of the species
-
Submitter Organization
-, National Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences
Contact
Zhongyi Hua, njbxhzy@hotmail.com
Sequence author(s)
Zhongyi Hua, Yuan Yuan
Released Date
2020-01-14
Assembly Level
Complete genome
Genome Representation
Full Genome
Assembly method
SMRT 5.0.1
Sequencing & coverage
PacBio 200.0
Download
DNA GFF RNA Protein
Reannotation DNA Reannotation GFF Reannotation RNA Reannotation Protein
Publication(s)
Zhongyi Hua, et al. Isolation, genomic characterization, and mushroom growth-promoting effect of the first fungus-derived Rhizobium. Frontiers in Microbiology. 2022, 13: 947687.
Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
GWHABKA00000000 GWHRA_ABKA00000000.1 RhizobiumCACMS001 Complete genome 2020-01-14 DNA GFF RNA Protein
Reannotation DNA Reannotation GFF Reannotation RNA Reannotation Protein

Statistics of Genome Assembly

Genome size (bp) 6,461,713
GC content 60.86%
Chromosomes sequence No. 1
Plasmids sequence No. 1
Annotation of Whole Genome Assembly
Protein tRNA rRNA Others Total
Chromosome 3,939 52 10 1 4,002
Plasmid 2,232 4 3 0 2,239
Total 6,171 56 13 1 6,241
Annotation Details
ChrID Protein tRNA rRNA Others Total
chr1 3,939 52 10 1 4,002
pCACMS1 2,232 4 3 0 2,239
Total 6,171 56 13 1 6,241

Statistics of Genome Assembly

Genome size (bp) 6,461,713
GC content 60.86%
Chromosomes sequence No. 1
Plasmids sequence No. 1
Annotation of Whole Genome Assembly
Protein tRNA rRNA ncRNA Pseudogene Others Total
Total 2,162 4 3 0 61 9 2,239