Scientific Name
mouse gut metagenome
Common Names
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Bioproject
PRJCA001337
Biosample
SAMC124596
Accession No.
GWHABIN00000000
GWH reannotation accession
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GSA raw reads
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GVM variations of the species
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Submitter Organization
State Key Laboratory of Cardiovascular Disease, Fuwai Hospital, National Center for Cardiovascular Diseases, Chinese Academy of Medical Sciences and Peking Union Medical College
Contact
Hao Li, lihao@bjmu.edu.cn
Sequence author(s)
Hao Li
Released Date
2020-04-21
Assembly Level
Draft genome in scaffold level
Genome Representation
Full Genome
Assembly method
SOAPdenovo v2.04
Sequencing & coverage
Illumina Hiseq X Ten 60.0
Download
DNA
Publication(s)
Hao Li, et al. Alterations of gut microbiota contribute to the progression of unruptured intracranial aneurysms. Nature Communications. 2020, 11(1): 3218.
Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
GWHABIN00000000 - mice.trans.UIA.8 Draft genome in scaffold level 2020-04-21 DNA

Statistics of Genome Assembly

Genome size (bp) 46,435,700
GC content 47.45%
Scaffold sequence No. 9,903
Maximum scaffold sequence length (bp) 453,218
Minimum scaffold sequence length (bp) 500
Average scaffold sequence length (bp) 4,689
Scaffold N50 (bp) 45,347
Scaffold N90 (bp) 1,200