Scientific Name
mouse gut metagenome
Common Names
-
Bioproject
PRJCA001337
Biosample
SAMC124578
Accession No.
GWHABHV00000000
GWH reannotation accession
-
GSA raw reads
-
GVM variations of the species
-
Submitter Organization
State Key Laboratory of Cardiovascular Disease, Fuwai Hospital, National Center for Cardiovascular Diseases, Chinese Academy of Medical Sciences and Peking Union Medical College
Contact
Hao Li, lihao@bjmu.edu.cn
Sequence author(s)
Hao Li
Released Date
2020-04-23
Assembly Level
Draft genome in scaffold level
Genome Representation
Full Genome
Assembly method
SOAPdenovo v2.04
Sequencing & coverage
Illumina Hiseq X Ten 60.0
Download
DNA
Publication(s)
Hao Li, et al. Alterations of gut microbiota contribute to the progression of unruptured intracranial aneurysms. Nature Communications. 2020, 11(1): 3218.
Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
GWHABHV00000000 - mice.antibiotic.5 Draft genome in scaffold level 2020-04-23 DNA

Statistics of Genome Assembly

Genome size (bp) 4,900,485
GC content 50.66%
Scaffold sequence No. 594
Maximum scaffold sequence length (bp) 98,435
Minimum scaffold sequence length (bp) 500
Average scaffold sequence length (bp) 8,250
Scaffold N50 (bp) 19,003
Scaffold N90 (bp) 4,336