- Scientific Name
- Populus tremula
- Common Names
- European aspen;
- Bioproject
- PRJCA002626
- Biosample
- SAMC185796
- Accession No.
- GWHAMKC01000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- College of Life Science, China West Normal University
- Contact
- Zhe Hou, houzhexhsd@sina.com
- Sequence author(s)
- Zhe Hou
- Released Date
- 2020-05-16
- Assembly Level
- Complete genome
- Genome Representation
- Partial Genome
- Assembly method
- Novoplasty 3.8.3
- Sequencing & coverage
- Illumina HiSeq 4000 1000.0
- Download
-
DNA
GFF
RNA
Protein
- Publication(s)
- Ang Li, et al. The complete chloroplast genome sequence of Populus tremula (Salicaceae). Mitochondrial DNA. Part B Resources. 2020, 5(3): 2195-2196.
Statistics of Genome Assembly
| Genome size (bp) | 156,664 |
| GC content | 36.72% |
| Organellas sequence No. | 1 |
Annotation of Whole Genome Assembly
| Protein | tRNA | rRNA | Others | Total | |
|---|---|---|---|---|---|
| Chloroplast | 86 | 37 | 8 | 2 | 133 |
| Total | 86 | 37 | 8 | 2 | 133 |
Annotation Details
| ChrID | Protein | tRNA | rRNA | Others | Total |
|---|---|---|---|---|---|
| Chloroplast | 86 | 37 | 8 | 2 | 133 |
| Total | 86 | 37 | 8 | 2 | 133 |