Scientific Name
Sphingomonas
Common Names
-
Bioproject
PRJCA001911
Biosample
SAMC114035
Accession No.
GWHABGP00000000
GWH reannotation accession
GWHRA_ABGP00000000.1
GSA raw reads
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GVM variations of the species
-
Submitter Organization
State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, China, Shanghai Jiao Tong University
Contact
Shanshan Yang, 1210882010@qq.com
Sequence author(s)
Shanshan Yang
Released Date
2019-11-27
Assembly Level
Complete genome
Genome Representation
Full Genome
Assembly method
Canu 20191120
Sequencing & coverage
Nanopore 229.1
Download
DNA
Reannotation DNA Reannotation GFF Reannotation RNA Reannotation Protein
Publication(s)
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Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
GWHABGP00000000 GWHRA_ABGP00000000.1 Sphingomonas profundi sp. LMO-1 Complete genome 2019-11-27 DNA
Reannotation DNA Reannotation GFF Reannotation RNA Reannotation Protein

Statistics of Genome Assembly

Genome size (bp) 4,538,634
GC content 69.20%
Chromosomes sequence No. 1

Statistics of Genome Assembly

Genome size (bp) 4,538,634
GC content 69.20%
Chromosomes sequence No. 1
Annotation of Whole Genome Assembly
Protein tRNA rRNA Pseudogene Others Total
Total 4,206 47 6 74 9 4,342