Scientific Name
Dechloromonas sp.
Common Names
-
Bioproject
PRJCA001854
Biosample
SAMC112126
Accession No.
GWHABGB00000000
GWH reannotation accession
GWHRA_ABGB00000000.1
GSA raw reads
-
GVM variations of the species
-
Submitter Organization
School of Life Sciences and Biotechnology, Shanghai Jiao Tong University
Contact
Han Wang, wang1990hk@163.com
Sequence author(s)
Han Wang
Released Date
2019-10-28
Assembly Level
Draft genome in scaffold level
Genome Representation
Full Genome
Assembly method
IDBA-UD 1.1.1
Sequencing & coverage
Illumina HiSeq X Ten 42.0
Download
DNA
Reannotation DNA Reannotation GFF Reannotation RNA Reannotation Protein
Publication(s)
-
Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
GWHABGB00000000 GWHRA_ABGB00000000.1 Mar_E0152_030 Draft genome in scaffold level 2019-10-28 DNA
Reannotation DNA Reannotation GFF Reannotation RNA Reannotation Protein

Statistics of Genome Assembly

Genome size (bp) 4,099,803
GC content 62.60%
Scaffold sequence No. 147
Maximum scaffold sequence length (bp) 146,431
Minimum scaffold sequence length (bp) 1,007
Average scaffold sequence length (bp) 27,890
Scaffold N50 (bp) 74,883
Scaffold N90 (bp) 14,439

Statistics of Genome Assembly

Genome size (bp) 4,099,803
GC content 62.60%
Scaffold sequence No. 147
Maximum scaffold sequence length (bp) 146,431
Minimum scaffold sequence length (bp) 1,007
Average scaffold sequence length (bp) 27,890
Scaffold N50 (bp) 74,883
Scaffold N90 (bp) 14,439
Annotation of Whole Genome Assembly
Protein tRNA rRNA ncRNA Pseudogene Others Total
Total 3,926 47 5 1 64 165 4,208