Scientific Name
Janthinobacterium sp.
Common Names
-
Bioproject
PRJCA001854
Biosample
SAMC112121
Accession No.
GWHABFW00000000
GWH reannotation accession
GWHRA_ABFW00000000.1
GSA raw reads
-
GVM variations of the species
-
Submitter Organization
School of Life Sciences and Biotechnology, Shanghai Jiao Tong University
Contact
Han Wang, wang1990hk@163.com
Sequence author(s)
Han Wang
Released Date
2019-10-28
Assembly Level
Draft genome in scaffold level
Genome Representation
Full Genome
Assembly method
IDBA-UD 1.1.1
Sequencing & coverage
Illumina HiSeq X Ten 42.0
Download
DNA
Reannotation DNA Reannotation GFF Reannotation RNA Reannotation Protein
Publication(s)
-
Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
GWHABFW00000000 GWHRA_ABFW00000000.1 Mar_E0152_024 Draft genome in scaffold level 2019-10-28 DNA
Reannotation DNA Reannotation GFF Reannotation RNA Reannotation Protein

Statistics of Genome Assembly

Genome size (bp) 6,809,587
GC content 64.27%
Scaffold sequence No. 133
Maximum scaffold sequence length (bp) 579,576
Minimum scaffold sequence length (bp) 1,009
Average scaffold sequence length (bp) 51,200
Scaffold N50 (bp) 282,212
Scaffold N90 (bp) 58,017

Statistics of Genome Assembly

Genome size (bp) 6,809,587
GC content 64.27%
Scaffold sequence No. 133
Maximum scaffold sequence length (bp) 579,576
Minimum scaffold sequence length (bp) 1,009
Average scaffold sequence length (bp) 51,200
Scaffold N50 (bp) 282,212
Scaffold N90 (bp) 58,017
Annotation of Whole Genome Assembly
Protein tRNA rRNA ncRNA Pseudogene Others Total
Total 6,153 75 3 1 71 150 6,453