- Scientific Name
- Prunus domestica
- Common Names
- plum;
- Bioproject
- PRJCA002624
- Biosample
- SAMC183150
- Accession No.
- GWHALOD01000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- College of Horticulture and Forestry, Xinjiang Agricultural University
- Contact
- Wenjuan Geng, gwj0526@163.com
- Sequence author(s)
- Wenjuan Geng
- Released Date
- 2020-05-03
- Assembly Level
- Complete genome
- Genome Representation
- Partial Genome
- Assembly method
- SPAdes 3.10.0
- Sequencing & coverage
- Illumina HiSeq 4000 1248.0
- Download
-
DNA
GFF
RNA
Protein
- Publication(s)
- Wenjuan Geng, et al. The complete chloroplast genome of Prunus domestica L. (Rosaceae) and its phylogenetic implication. Mitochondrial DNA. Part B, Resources. 2020, 5(3): 2783-2784.
Statistics of Genome Assembly
| Genome size (bp) | 157,395 |
| GC content | 36.76% |
| Organellas sequence No. | 1 |
Annotation of Whole Genome Assembly
| Protein | tRNA | rRNA | Others | Total | |
|---|---|---|---|---|---|
| Chloroplast | 85 | 37 | 8 | 2 | 132 |
| Total | 85 | 37 | 8 | 2 | 132 |
Annotation Details
| ChrID | Protein | tRNA | rRNA | Others | Total |
|---|---|---|---|---|---|
| Chloroplast | 85 | 37 | 8 | 2 | 132 |
| Total | 85 | 37 | 8 | 2 | 132 |