Scientific Name
Ilyonectria robusta
Common Names
-
Bioproject
PRJCA000371
Biosample
SAMC018833
Accession No.
GWHAAAI00000000
Submitter Organization
Institute of Special Animal and Plant Science, Chinese Academy of Agricultural Sciences
Contacts
Yiming Guan, gymcau@126.com
Meili Chen, chenml@big.ac.cn
Jingfa Xiao, xiaojingfa@big.ac.cn
Released Date
2020-02-05
Assembly Level
Draft genome in contig level
Genome Representation
Full Genome
Reference Genome
yes
Assembly method
HGAP v3
Sequencing & coverage
PacBio 65.48
Illumina HiSeq 2000 296.0
Download
DNA GFF RNA Protein
Publication(s)
Yiming Guan, et al. Whole-genome and time-course dual RNA-Seq analyses reveal chronic pathogenicity-related gene dynamics in the ginseng rusty root rot pathogen Ilyonectria robusta. Scientic Reports. 2020, 10: 1586.
Assembly Accession Assembly Name Assembly Level Release Date Download Files
GWHAAAI00000000 XF Draft genome in contig level 2020-02-05 DNA GFF RNA Protein

Statistics of Genome Assembly

Genome size (bp) 58,742,480
GC content 49.32%
Contig sequence No. 53
Maximum contig sequence length (bp) 7,641,366
Minimum contig sequence length (bp) 1,137
Average contig sequence length (bp) 1,108,349
Contig N50 (bp) 3,405,880
Contig N90 (bp) 1,262,619
Annotation of Whole Genome Assembly
Protein tRNA rRNA ncRNA Total
Total 17,438 221 57 36 17,752