Scientific Name
Alphaproteobacteria
Common Names
Alphabacteria, alpha proteobacteria, alpha subdivision, alpha subgroup, Proteobacteria alpha subdivision, Purple bacteria, alpha subdivision
Bioproject
PRJCA000796
Biosample
SAMC026960
Accession No.
GWHAACO00000000
GWH reannotation accession
-
GSA raw reads
-
GVM variations of the species
-
Submitter Organization
Science, Institute of Deep-Sea Science and Engineering, Chinese Academy of Sciences
Contact
Zhaoming Gao, gaozm@idsse.ac.cn
Sequence author(s)
Zhaoming Gao, Jiaomei Huang
Released Date
2019-10-10
Assembly Level
Draft genome in scaffold level
Genome Representation
Full Genome
Assembly method
SPAdes v3.6.2
Sequencing & coverage
MiSeq 134.0
Download
DNA
Publication(s)
Zhaoming Gao, et al. In situ meta‐omic insights into the community compositions and ecological roles of hadal microbes in the Mariana Trench. Environmental Microbiology. 2019.
Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
GWHAACO00000000 - TS03-MIX-P10 Draft genome in scaffold level 2019-10-10 DNA

Statistics of Genome Assembly

Genome size (bp) 2,633,598
GC content 64.20%
Scaffold sequence No. 115
Maximum scaffold sequence length (bp) 118,584
Minimum scaffold sequence length (bp) 2,030
Average scaffold sequence length (bp) 22,901
Scaffold N50 (bp) 31,881
Scaffold N90 (bp) 10,685