- Scientific Name
- Eriobotrya japonica
- Common Names
- loquat;
- Bioproject
- PRJCA001836
- Biosample
- SAMC111316
- Accession No.
- GWHAAZU00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR078406
- GVM variations of the species
- -
- Submitter Organization
- -, Forestry and Pomology Research Institute, Shanghai Academy of Agricultural Sciences
- Contact
- Shuang Jiang, fruitshuang@qq.com
- Sequence author(s)
- Shuang Jiang
- Released Date
- 2020-02-20
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Smartdenovo 1.0
- Sequencing & coverage
- Nanopore 100.0
- Download
-
DNA
- Publication(s)
- Shuang Jiang, et al. Chromosome-level genome assembly and annotation of the loquat (Eriobotrya japonica) genome. GigaScience. 2020, 9(3): giaa015.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHAAZU00000000 | - | LG1 | Draft genome in chromosome level | 2020-02-20 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 760,132,407 |
| GC content | 37.79% |
| Chromosomes sequence No. | 17 |
| Genome sequence No. | 531 |
| Maximum genome sequence length (bp) | 48,569,326 |
| Minimum genome sequence length (bp) | 20,916 |
| Average genome sequence length (bp) | 1,431,511 |
| Genome sequence N50 (bp) | 39,655,141 |
| Genome sequence N90 (bp) | 800,000 |