Scientific Name
Acidipila
Common Names
-
Bioproject
PRJCA001827
Biosample
SAMC111081
Accession No.
GWHAAZR00000000
GWH reannotation accession
GWHRA_AAZR00000000.1
GSA raw reads
-
GVM variations of the species
-
Submitter Organization
School of Oceanography, Shanghai Jiao Tong University
Contact
Zhifeng Yang, 1005177545@qq.com
Sequence author(s)
Zhifeng Yang
Released Date
2019-10-12
Assembly Level
Draft genome in scaffold level
Genome Representation
Partial Genome
Assembly method
idba_ud v1.1.1
Sequencing & coverage
Illumina HiSeq 2000 20.0
Download
DNA
Reannotation DNA Reannotation GFF Reannotation RNA Reannotation Protein
Publication(s)
-
Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
GWHAAZR00000000 GWHRA_AAZR00000000.1 Bin5_1 Draft genome in scaffold level 2019-10-12 DNA
Reannotation DNA Reannotation GFF Reannotation RNA Reannotation Protein

Statistics of Genome Assembly

Genome size (bp) 4,118,028
GC content 59.81%
Scaffold sequence No. 91
Maximum scaffold sequence length (bp) 222,510
Minimum scaffold sequence length (bp) 2,684
Average scaffold sequence length (bp) 45,253
Scaffold N50 (bp) 62,342
Scaffold N90 (bp) 23,224

Statistics of Genome Assembly

Genome size (bp) 4,118,028
GC content 59.81%
Scaffold sequence No. 91
Maximum scaffold sequence length (bp) 222,510
Minimum scaffold sequence length (bp) 2,684
Average scaffold sequence length (bp) 45,253
Scaffold N50 (bp) 62,342
Scaffold N90 (bp) 23,224
Annotation of Whole Genome Assembly
Protein tRNA rRNA Pseudogene Others Total
Total 3,482 46 1 20 98 3,647