Scientific Name
Paludibacter
Common Names
-
Bioproject
PRJCA001827
Biosample
SAMC111085
Accession No.
GWHAAZN00000000
GWH reannotation accession
GWHRA_AAZN00000000.1
GSA raw reads
-
GVM variations of the species
-
Submitter Organization
School of Oceanography, Shanghai Jiao Tong University
Contact
Zhifeng Yang, 1005177545@qq.com
Sequence author(s)
Zhifeng Yang
Released Date
2019-10-12
Assembly Level
Draft genome in scaffold level
Genome Representation
Full Genome
Assembly method
idba_ud v1.1.1 v1.1.1
Sequencing & coverage
Illumina HiSeq 2000 25.0
Download
DNA
Reannotation DNA Reannotation GFF Reannotation RNA Reannotation Protein
Publication(s)
-
Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
GWHAAZN00000000 GWHRA_AAZN00000000.1 Bin2_4 Draft genome in scaffold level 2019-10-12 DNA
Reannotation DNA Reannotation GFF Reannotation RNA Reannotation Protein

Statistics of Genome Assembly

Genome size (bp) 4,790,818
GC content 35.24%
Scaffold sequence No. 207
Maximum scaffold sequence length (bp) 149,138
Minimum scaffold sequence length (bp) 2,510
Average scaffold sequence length (bp) 23,144
Scaffold N50 (bp) 39,325
Scaffold N90 (bp) 10,421

Statistics of Genome Assembly

Genome size (bp) 4,790,818
GC content 35.24%
Scaffold sequence No. 207
Maximum scaffold sequence length (bp) 149,138
Minimum scaffold sequence length (bp) 2,510
Average scaffold sequence length (bp) 23,144
Scaffold N50 (bp) 39,325
Scaffold N90 (bp) 10,421
Annotation of Whole Genome Assembly
Protein tRNA rRNA Pseudogene Others Total
Total 3,761 44 4 51 214 4,074