- Scientific Name
- Shiraia bambusicola
- Common Names
- -
- Bioproject
- PRJCA001683
- Biosample
- SAMC090965
- Accession No.
- GWHAAZB00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Institute of biotechnology, Institute of Biotechnology, Guizhou Academy of Agricultural Sciences
- Contact
- Xiyi Ren, renxiyiyx@163.com
- Sequence author(s)
- Xiyi Ren, Yongxiang Liu
- Released Date
- 2020-02-03
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- SOAPdenovo 1.05
- Sequencing & coverage
- Illumina HiSeq 2000 32.54
- Download
-
DNA
- Publication(s)
- Xiyi Ren, et al. Sequencing and Functional Annotation of the Whole Genome of Shiraia bambusicola. G3: GENES|GENOMES|GENETICS. 2020, 10(1):23-35.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHAAZB00000000 | - | FA | Draft genome in scaffold level | 2020-02-03 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 33,103,041 |
| GC content | 48.89% |
| Scaffold sequence No. | 333 |
| Maximum scaffold sequence length (bp) | 1,266,761 |
| Minimum scaffold sequence length (bp) | 1,014 |
| Average scaffold sequence length (bp) | 99,409 |
| Scaffold N50 (bp) | 546,034 |
| Scaffold N90 (bp) | 118,150 |