Scientific Name
Gammaproteobacteria
Common Names
gamma proteobacteria, gamma subdivision, gamma subgroup, Proteobacteria gamma subdivision, Purple bacteria, gamma subdivision
Bioproject
PRJCA000796
Biosample
SAMC026971
Accession No.
GWHAABX00000000
GWH reannotation accession
-
GSA raw reads
-
GVM variations of the species
-
Submitter Organization
Science, Institute of Deep-Sea Science and Engineering, Chinese Academy of Sciences
Contact
Zhaoming Gao, gaozm@idsse.ac.cn
Sequence author(s)
Zhaoming Gao, Jiaomei Huang
Released Date
2019-10-10
Assembly Level
Draft genome in scaffold level
Genome Representation
Full Genome
Assembly method
SPAdes v3.6.2
Sequencing & coverage
MiSeq 58.0
Download
DNA
Publication(s)
Zhaoming Gao, et al. In situ meta‐omic insights into the community compositions and ecological roles of hadal microbes in the Mariana Trench. Environmental Microbiology. 2019.
Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
GWHAABX00000000 - TS03-MIX-P21 Draft genome in scaffold level 2019-10-10 DNA

Statistics of Genome Assembly

Genome size (bp) 1,580,268
GC content 37.19%
Scaffold sequence No. 13
Maximum scaffold sequence length (bp) 382,994
Minimum scaffold sequence length (bp) 2,676
Average scaffold sequence length (bp) 121,559
Scaffold N50 (bp) 211,701
Scaffold N90 (bp) 71,967