- Scientific Name
- Planctomycetales
- Common Names
- -
- Bioproject
- PRJCA000796
- Biosample
- SAMC026980
- Accession No.
- GWHAABP00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Science, Institute of Deep-Sea Science and Engineering, Chinese Academy of Sciences
- Contact
- Zhaoming Gao, gaozm@idsse.ac.cn
- Sequence author(s)
- Zhaoming Gao, Jiaomei Huang
- Released Date
- 2019-10-11
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- SPAdes v3.6.2
- Sequencing & coverage
- MiSeq 28.0
- Download
-
DNA
- Publication(s)
- Zhaoming Gao, et al. In situ meta‐omic insights into the community compositions and ecological roles of hadal microbes in the Mariana Trench. Environmental Microbiology. 2019.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHAABP00000000 | - | TS03-MIX-PL30 | Draft genome in scaffold level | 2019-10-11 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 5,579,516 |
| GC content | 57.90% |
| Scaffold sequence No. | 346 |
| Maximum scaffold sequence length (bp) | 98,952 |
| Minimum scaffold sequence length (bp) | 2,037 |
| Average scaffold sequence length (bp) | 16,126 |
| Scaffold N50 (bp) | 19,962 |
| Scaffold N90 (bp) | 8,310 |