Genome Warehouse

Scientific Name: Zea mays
Common Names: maize; Zea mays var. japonica
Bioproject: PRJCA001247
Biosample: SAMC060642
Accession No.: GWHAAJX00000000
GWH reannotation accession: -
GSA raw reads: CRR048365
GVM variations of the species: 73,140,072 (SNP), 16,129,758 (Indel)
Submitter Organization: CAS Key Laboratory of Genome Sciences and Information, Beijing Institute of Genomics, Chinese Academy of Sciences / China National Center for Bioinformation
Contact: Chunhui Li, lichunhui331@163.com
Sequence author(s): Chunhui Li, Wei Song, Yingfeng Luo, Shenghan Gao, Jiuran Zhao, Songnian Hu, Yuandong Wang
Released Date: 2019-02-22
Assembly Level: Draft genome in chromosome level
Genome Representation: Full Genome
Assembly method: DeNovoMagic 2
Sequencing & coverage: Illumina HiSeq 2500 100.0
Illumina HiSeq 3000 100.0
Download: DNA GFF RNA Protein
Publication(s): Chunhui Li, et al. The HuangZaoSi maize genome provides insights into genomic variation and improvement history of maize. Molecular Plant. 2019, 12(3):402-409.

Assembly Accession	GWH Reannotation Accession	Assembly Name	Assembly Level	Released Date	Download Files
GWHAAJX00000000	-	Zmays_HZS	Draft genome in chromosome level	2019-02-22	DNA GFF RNA Protein

Genome size (bp)	2,209,393,227
GC content	46.72%
Chromosomes sequence No.	10
Genome sequence No.	12
Maximum genome sequence length (bp)	302,432,610
Minimum genome sequence length (bp)	5,592,564
Average genome sequence length (bp)	184,116,102
Genome sequence N50 (bp)	223,926,258
Genome sequence N90 (bp)	149,858,844

Annotation of Whole Genome Assembly

Annotation Details