Scientific Name
Scatophagus argus
Common Names
-
Bioproject
PRJCA003475
Biosample
SAMC245245
Accession No.
GWHAOSK00000000.1
GSA raw reads
-
GVM variations
-
Submitter Organization
Fisheries College, Guangdong Ocean University
Contact
Dongneng Jiang, jdn1987@163.com
Sequence author(s)
Yuanqing Huang, Umar Farouk Mustapha, Yang Huang, Changxu Tian, Wei Yang, Huapu; Chen, Siping Deng, Chunhua Zhu, Dongneng Jiang, Guangli Li
Released Date
2021-02-19
Assembly Level
Draft genome in chromosome level
Genome Representation
Full Genome
Reference Genome
yes
Assembly method
WTDBG 1.0
LACHESIS 2013.12.01
Sequencing & coverage
PacBio 121.0
Illumina HiSeq X Ten 121.0
Download
DNA GFF RNA Protein
Publication(s)
-
Assembly Accession Assembly Name Assembly Level Release Date Download Files
GWHAOSK00000000 PacBio and Hi-C Draft genome in chromosome level 2021-02-02 DNA
GWHAOSK00000000.1 PacBio and Hi-C Draft genome in chromosome level 2021-02-19 DNA GFF RNA Protein

Statistics of Genome Assembly

Genome size (bp) 572,427,211
GC content 41.47%
Genome sequence No. 177
Maximum genome sequence length (bp) 30,166,221
Minimum genome sequence length (bp) 3,340
Average genome sequence length (bp) 3,234,052
Genome sequence N50 (bp) 24,670,690
Genome sequence N90 (bp) 19,600,000
Annotation of Whole Genome Assembly
Protein Total
Total 24,200 24,200