Genome Warehouse


  • Scatophagus argus
  • PacBio and Hi-C
    • Scientific Name
    Scatophagus argus
    Common Names
    -
    Bioproject
    PRJCA003475
    Biosample
    SAMC245245
    Accession No.
    GWHAOSK00000000.1
    GSA raw reads
    -
    GVM variations
    -
    Submitter Organization
    Fisheries College, Guangdong Ocean University
    Contact
    Dongneng Jiang, jdn1987@163.com
    Sequence author(s)
    Yuanqing Huang, Umar Farouk Mustapha, Yang Huang, Changxu Tian, Wei Yang, Huapu; Chen, Siping Deng, Chunhua Zhu, Dongneng Jiang, Guangli Li
    Released Date
    2021-02-19
    Assembly Level
    Draft genome in chromosome level
    Genome Representation
    Full Genome
    Reference Genome
    yes
    Assembly method
    WTDBG 1.0
    LACHESIS 2013.12.01
    Sequencing & coverage
    PacBio 121.0
    Illumina HiSeq X Ten 121.0
    Download
    DNA GFF RNA Protein
    Publication(s)
    -
    Assembly Accession Assembly Name Assembly Level Release Date Download Files
    GWHAOSK00000000 PacBio and Hi-C Draft genome in chromosome level 2021-02-02 DNA
    GWHAOSK00000000.1 PacBio and Hi-C Draft genome in chromosome level 2021-02-19 DNA GFF RNA Protein

    Statistics of Genome Assembly

    Genome size (bp) 572,427,211
    GC content 41.47%
    Genome sequence No. 177
    Maximum genome sequence length (bp) 30,166,221
    Minimum genome sequence length (bp) 3,340
    Average genome sequence length (bp) 3,234,052
    Genome sequence N50 (bp) 24,670,690
    Genome sequence N90 (bp) 19,600,000
    Annotation of Whole Genome Assembly
    Protein Total
    Total 24,200 24,200