Scientific Name
Severe acute respiratory syndrome coronavirus 2
Common Names
-
Bioproject
PRJCA002533
Biosample
SAMC330980
Accession No.
GWHBABJ01000000
GWH reannotation accession
-
GSA raw reads
-
GVM variations of the species
16,114 (SNP), 820 (Indel)
Submitter Organization
Institute of Infectious Diseases, Beijing Ditan Hospital, Capital Medical University
Contact
Hui Zeng, zenghui@ccmu.edu.cn
Sequence author(s)
Hui Zeng
Released Date
2021-03-13
Assembly Level
Draft genome in scaffold level
Genome Representation
Full Genome
Assembly method
BCFtools v0.1.19
Sequencing & coverage
Nextseq 500 0.9
Download
DNA
Publication(s)
Ju Zhang, et al. Phylogenomic tracing of asymptomatic transmission in a COVID-19 outbreak. Innovation. 2021, 2(2): 100099.
Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
GWHBABJ01000000 - P14_20200310_sputum Draft genome in scaffold level 2021-03-13 DNA

Statistics of Genome Assembly

Genome size (bp) 29,652
GC content 37.58%
Scaffold sequence No. 1
Maximum scaffold sequence length (bp) 29,652
Minimum scaffold sequence length (bp) 29,652
Average scaffold sequence length (bp) 29,652
Scaffold N50 (bp) 29,652
Scaffold N90 (bp) 29,652