Scientific Name
Severe acute respiratory syndrome coronavirus 2
Common Names
-
Bioproject
PRJCA004109
Biosample
SAMC299968
Accession No.
GWHAZOR01000000
GWH reannotation accession
-
GSA raw reads
-
GVM variations of the species
16,114 (SNP), 820 (Indel)
Submitter Organization
Jamil-ur-Rahman Center for Genome Research, Dr. Panjwani Center for Molecular Medicine and Drug Research, ICCBS, University of Karachi
Contact
Ishtiaq Khan, ishtiaqchemist@gmail.com
Sequence author(s)
Muhammad Shakeel, Muhammad Irfan, Zaibun Nisa, Muhammad Rashid, Sabeeta Ansari, Ishtiaq Khan
Released Date
2021-01-05
Assembly Level
Draft genome in chromosome level
Genome Representation
Full Genome
Assembly method
Velvet 1.0.0
Sequencing & coverage
Illumina MiSeq 99.13
Download
DNA GFF RNA Protein
Publication(s)
-
Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
GWHAZOR01000000 - JRCGR-KHI35 Draft genome in chromosome level 2021-01-05 DNA GFF RNA Protein

Statistics of Genome Assembly

Genome size (bp) 29,766
GC content 38.00%
Genome sequence No. 1
Maximum genome sequence length (bp) 29,766
Minimum genome sequence length (bp) 29,766
Average genome sequence length (bp) 29,766
Genome sequence N50 (bp) 29,766
Genome sequence N90 (bp) 29,766
Annotation of Whole Genome Assembly
Protein Total
Total 12 12